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Degrade, Move, Regroup: Signaling Control of Splicing Proteins

Overview
Specialty Biochemistry
Date 2011 May 21
PMID 21596569
Citations 52
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Abstract

With recent advances in microarrays and sequencing it is now relatively straightforward to compare pre-mRNA splicing patterns in different cellular conditions on a genome-wide scale. Such studies have revealed extensive changes in cellular splicing programs in response to stimuli such as neuronal depolarization, DNA damage, immune signaling and cellular metabolic changes. However, for many years our understanding of the signaling pathways responsible for such splicing changes was greatly lacking. Excitingly, over the past few years this gap has begun to close. Recent studies now suggest notable trends in the mechanisms that link cellular stimuli to downstream alternative splicing events. These include regulated synthesis or degradation of splicing factors, differential protein-protein interactions, altered nuclear translocation and changes in transcription elongation.

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References
1.
Lynch K . Regulation of alternative splicing by signal transduction pathways. Adv Exp Med Biol. 2008; 623:161-74. DOI: 10.1007/978-0-387-77374-2_10. View

2.
Pan Q, Shai O, Lee L, Frey B, Blencowe B . Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nat Genet. 2008; 40(12):1413-5. DOI: 10.1038/ng.259. View

3.
Bedford M, Richard S . Arginine methylation an emerging regulator of protein function. Mol Cell. 2005; 18(3):263-72. DOI: 10.1016/j.molcel.2005.04.003. View

4.
Munoz M, Perez Santangelo M, Paronetto M, Mata M, Pelisch F, Boireau S . DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation. Cell. 2009; 137(4):708-20. DOI: 10.1016/j.cell.2009.03.010. View

5.
Lee J, Tang Z, Black D . An inducible change in Fox-1/A2BP1 splicing modulates the alternative splicing of downstream neuronal target exons. Genes Dev. 2009; 23(19):2284-93. PMC: 2758739. DOI: 10.1101/gad.1837009. View