» Articles » PMID: 21454506

Modulation of Nucleotide Specificity of Thermophilic F(o)F(1)-ATP Synthase by Epsilon-subunit

Overview
Journal J Biol Chem
Specialty Biochemistry
Date 2011 Apr 2
PMID 21454506
Citations 3
Authors
Affiliations
Soon will be listed here.
Abstract

The C-terminal two α-helices of the ε-subunit of thermophilic Bacillus F(o)F(1)-ATP synthase (TF(o)F(1)) adopt two conformations: an extended long arm ("up-state") and a retracted hairpin ("down-state"). As ATP becomes poor, ε changes the conformation from the down-state to the up-state and suppresses further ATP hydrolysis. Using TF(o)F(1) expressed in Escherichia coli, we compared TF(o)F(1) with up- and down-state ε in the NTP (ATP, GTP, UTP, and CTP) synthesis reactions. TF(o)F(1) with the up-state ε was achieved by inclusion of hexokinase in the assay and TF(o)F(1) with the down-state ε was represented by εΔc-TF(o)F(1), in which ε lacks C-terminal helices and hence cannot adopt the up-state under any conditions. The results indicate that TF(o)F(1) with the down-state ε synthesizes GTP at the same rate of ATP, whereas TF(o)F(1) with the up-state ε synthesizes GTP at a half-rate. Though rates are slow, TF(o)F(1) with the down-state ε even catalyzes UTP and CTP synthesis. Authentic TF(o)F(1) from Bacillus cells also synthesizes ATP and GTP at the same rate in the presence of adenosine 5'-(β,γ-imino)triphosphate (AMP-PNP), an ATP analogue that has been known to stabilize the down-state. NTP hydrolysis and NTP-driven proton pumping activity of εΔc-TF(o)F(1) suggests similar modulation of nucleotide specificity in NTP hydrolysis. Thus, depending on its conformation, ε-subunit modulates substrate specificity of TF(o)F(1).

Citing Articles

Torque generation mechanism of F1-ATPase upon NTP binding.

Arai H, Yukawa A, Iwatate R, Kamiya M, Watanabe R, Urano Y Biophys J. 2014; 107(1):156-64.

PMID: 24988350 PMC: 4119285. DOI: 10.1016/j.bpj.2014.05.016.


Variations of subunit {varepsilon} of the Mycobacterium tuberculosis F1Fo ATP synthase and a novel model for mechanism of action of the tuberculosis drug TMC207.

Biukovic G, Basak S, Subramanian Manimekalai M, Rishikesan S, Roessle M, Dick T Antimicrob Agents Chemother. 2012; 57(1):168-76.

PMID: 23089752 PMC: 3535943. DOI: 10.1128/AAC.01039-12.


Kinetic equivalence of transmembrane pH and electrical potential differences in ATP synthesis.

Soga N, Kinosita Jr K, Yoshida M, Suzuki T J Biol Chem. 2012; 287(12):9633-9.

PMID: 22253434 PMC: 3308813. DOI: 10.1074/jbc.M111.335356.

References
1.
Suzuki T, Ueno H, Mitome N, Suzuki J, Yoshida M . F(0) of ATP synthase is a rotary proton channel. Obligatory coupling of proton translocation with rotation of c-subunit ring. J Biol Chem. 2002; 277(15):13281-5. DOI: 10.1074/jbc.M111210200. View

2.
Yoshida M, Muneyuki E, Hisabori T . ATP synthase--a marvellous rotary engine of the cell. Nat Rev Mol Cell Biol. 2001; 2(9):669-77. DOI: 10.1038/35089509. View

3.
Garcia J, Ogilvie I, Robinson B, Capaldi R . Structure, functioning, and assembly of the ATP synthase in cells from patients with the T8993G mitochondrial DNA mutation. Comparison with the enzyme in Rho(0) cells completely lacking mtdna. J Biol Chem. 2001; 275(15):11075-81. DOI: 10.1074/jbc.275.15.11075. View

4.
Senior A, Nadanaciva S, Weber J . The molecular mechanism of ATP synthesis by F1F0-ATP synthase. Biochim Biophys Acta. 2002; 1553(3):188-211. DOI: 10.1016/s0005-2728(02)00185-8. View

5.
Uhlin U, Cox G, Guss J . Crystal structure of the epsilon subunit of the proton-translocating ATP synthase from Escherichia coli. Structure. 1997; 5(9):1219-30. DOI: 10.1016/s0969-2126(97)00272-4. View