Desai K, Wanggou S, Luis E, Whetstone H, Yu C, Vanner R
Nat Commun. 2025; 16(1):1092.
PMID: 39904987
PMC: 11794873.
DOI: 10.1038/s41467-024-54858-y.
Swan G, Fujii C, Guzynski M, Page S, Meyers I, Penev Y
Front Immunol. 2025; 15:1469402.
PMID: 39882239
PMC: 11774700.
DOI: 10.3389/fimmu.2024.1469402.
Khoroshkin M, Zinkevich A, Aristova E, Yousefi H, Lee S, Mittmann T
bioRxiv. 2025; .
PMID: 39803435
PMC: 11722239.
DOI: 10.1101/2024.12.31.630783.
Zhou W, Du J, Jiao R, Wang X, Fang T, Huang G
BMC Plant Biol. 2025; 25(1):35.
PMID: 39789434
PMC: 11720866.
DOI: 10.1186/s12870-024-05788-w.
Su D, Jiang T, Song Y, Li D, Zhan S, Zhong T
Commun Biol. 2025; 8(1):31.
PMID: 39789228
PMC: 11718246.
DOI: 10.1038/s42003-025-07468-3.
SiCLAT: simultaneous imaging of chromatin loops and active transcription in living cells.
Wan X, Kong J, Hu X, Liu L, Yang Y, Li H
Genome Biol. 2025; 26(1):1.
PMID: 39748374
PMC: 11694377.
DOI: 10.1186/s13059-024-03463-9.
Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues.
Yu M, Zemke N, Chen Z, Juric I, Hu R, Raviram R
Nat Struct Mol Biol. 2024; .
PMID: 39681766
DOI: 10.1038/s41594-024-01431-2.
Central control of dynamic gene circuits governs T cell rest and activation.
Arce M, Umhoefer J, Arang N, Kasinathan S, Freimer J, Steinhart Z
Nature. 2024; 637(8047):930-939.
PMID: 39663454
PMC: 11754113.
DOI: 10.1038/s41586-024-08314-y.
The TRIM37 variant rs57141087 contributes to triple-negative breast cancer outcomes in Black women.
Tihagam R, Lou S, Zhao Y, Liu K, Singh A, Koo B
EMBO Rep. 2024; 26(1):245-272.
PMID: 39614126
PMC: 11723928.
DOI: 10.1038/s44319-024-00331-2.
TAD-dependent sub-TAD is required for enhancer-promoter interaction enabling the β-globin transcription.
Lee D, Kang J, Kim A
FASEB J. 2024; 38(22):e70181.
PMID: 39545685
PMC: 11698014.
DOI: 10.1096/fj.202401526RR.
Active enhancers: recent research advances and insights into disease.
Zhang J, Wang Q, Liu J, Duan Y, Liu Z, Zhang Z
Biol Direct. 2024; 19(1):112.
PMID: 39533395
PMC: 11556110.
DOI: 10.1186/s13062-024-00559-x.
Conserved helical motifs in the IKZF1 disordered region mediate NuRD interaction and transcriptional repression.
Zhang T, Wang Y, Montoya A, Patrascan I, Nebioglu N, Pallikonda H
Blood. 2024; 145(4):422-437.
PMID: 39437550
PMC: 7617475.
DOI: 10.1182/blood.2024024787.
Genome-Wide Profiling of H3K27ac Identifies TDO2 as a Pivotal Therapeutic Target in Metabolic Associated Steatohepatitis Liver Disease.
Zhu Y, Shang L, Tang Y, Li Q, Ding L, Wang Y
Adv Sci (Weinh). 2024; 11(45):e2404224.
PMID: 39364706
PMC: 11615751.
DOI: 10.1002/advs.202404224.
RNF20-mediated transcriptional pausing and VEGFA splicing orchestrate vessel growth.
Tetik-Elsherbiny N, Elsherbiny A, Setya A, Gahn J, Tang Y, Gupta P
Nat Cardiovasc Res. 2024; 3(10):1199-1216.
PMID: 39322771
PMC: 11473366.
DOI: 10.1038/s44161-024-00546-5.
Sexually dimorphic renal expression of mouse Klotho is directed by a kidney-specific distal enhancer responsive to HNF1b.
Jankowski J, Lee H, Liu C, Wilflingseder J, Hennighausen L
Commun Biol. 2024; 7(1):1142.
PMID: 39277686
PMC: 11401919.
DOI: 10.1038/s42003-024-06855-6.
Functional Characterization of Accessible Chromatin in Common Wheat.
Zheng D, Lin K, Yang X, Zhang W, Cheng X
Int J Mol Sci. 2024; 25(17).
PMID: 39273331
PMC: 11395023.
DOI: 10.3390/ijms25179384.
Predicting the Effect of miRNA on Gene Regulation to Foster Translational Multi-Omics Research-A Review on the Role of Super-Enhancers.
Das S, Rai S
Noncoding RNA. 2024; 10(4).
PMID: 39195574
PMC: 11357235.
DOI: 10.3390/ncrna10040045.
Single-cell multiomic analysis identifies macrophage subpopulations in promoting cardiac repair.
Fu M, Jia S, Xu L, Li X, Lv Y, Zhong Y
J Clin Invest. 2024; 134(19).
PMID: 39190625
PMC: 11444165.
DOI: 10.1172/JCI175297.
Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq.
Lyu R, Gao Y, Wu T, Ye C, Wang P, He C
Nat Commun. 2024; 15(1):6852.
PMID: 39127768
PMC: 11316786.
DOI: 10.1038/s41467-024-50680-8.
Genome-Wide Profiling of Cis-regulatory Elements in Mammalian Skin.
Johnson M, Mallarino R
Methods Mol Biol. 2024; 2805:127-135.
PMID: 39008178
DOI: 10.1007/978-1-0716-3854-5_8.