» Articles » PMID: 21290164

The Structure of the Klf4 DNA-binding Domain Links to Self-renewal and Macrophage Differentiation

Overview
Publisher Springer
Specialty Biology
Date 2011 Feb 4
PMID 21290164
Citations 49
Authors
Affiliations
Soon will be listed here.
Abstract

Krueppel-like factor 4 (Klf4) belongs to the Sp/Klf family of zinc-finger transcription factors and is indispensable for terminal maturation of epithelial tissues. Furthermore, it is part of a small set of proteins that are used to generate pluripotent embryonic stem cells from differentiated tissues. Herein, we describe that a Klf4 zinc-finger domain mutant induces self-renewal and block of maturation, while wild-type Klf4 induces terminal macrophage differentiation. Moreover, we present the crystal structure of the zinc-finger domain of Klf4 bound to its target DNA, revealing that primarily the two C-terminal zinc-finger motifs are required for site specificity. Lack of those two zinc fingers leads to deficiency of Klf4 to induce macrophage differentiation. The first zinc finger, on the other hand, inhibits the otherwise cryptic self-renewal and block of differentiation activity of Klf4. Our data show that impairing the DNA binding could potentially contribute to a monocytic leukemia.

Citing Articles

KLF4: a multifunctional nexus connecting tumor progression and immune regulation.

Ju Y, Xiao W, Mathis B, Shi Y Front Immunol. 2025; 16:1514780.

PMID: 39995670 PMC: 11848521. DOI: 10.3389/fimmu.2025.1514780.


Thermodynamic principles link transcription factor affinities to single-molecule chromatin states in cells.

Schaepe J, Fries T, Doughty B, Crocker O, Hinks M, Marklund E bioRxiv. 2025; .

PMID: 39975040 PMC: 11838358. DOI: 10.1101/2025.01.27.635162.


DNA-binding proteins from MBD through ZF to BEN: recognition of cytosine methylation status by one arginine with two conformations.

Zhang X, Blumenthal R, Cheng X Nucleic Acids Res. 2024; 52(19):11442-11454.

PMID: 39329271 PMC: 11514455. DOI: 10.1093/nar/gkae832.


Mechanism of phase condensation for chromosome architecture and function.

Park J, Kim J, Ryu J Exp Mol Med. 2024; 56(4):809-819.

PMID: 38658703 PMC: 11059216. DOI: 10.1038/s12276-024-01226-x.


Generation of canine induced pluripotent stem cells under feeder-free conditions using Sendai virus vector encoding six canine reprogramming factors.

Tsukamoto M, Kimura K, Yoshida T, Tanaka M, Kuwamura M, Ayabe T Stem Cell Reports. 2023; 19(1):141-157.

PMID: 38134923 PMC: 10828825. DOI: 10.1016/j.stemcr.2023.11.010.


References
1.
Kaczynski J, Cook T, Urrutia R . Sp1- and Krüppel-like transcription factors. Genome Biol. 2003; 4(2):206. PMC: 151296. DOI: 10.1186/gb-2003-4-2-206. View

2.
Alder J, Georgantas 3rd R, Hildreth R, Kaplan I, Morisot S, Yu X . Kruppel-like factor 4 is essential for inflammatory monocyte differentiation in vivo. J Immunol. 2008; 180(8):5645-52. PMC: 3074963. DOI: 10.4049/jimmunol.180.8.5645. View

3.
Lavery R, Sklenar H . The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids. J Biomol Struct Dyn. 1988; 6(1):63-91. DOI: 10.1080/07391102.1988.10506483. View

4.
Vonrhein C, Blanc E, Roversi P, Bricogne G . Automated structure solution with autoSHARP. Methods Mol Biol. 2006; 364:215-30. DOI: 10.1385/1-59745-266-1:215. View

5.
Pavletich N, Pabo C . Crystal structure of a five-finger GLI-DNA complex: new perspectives on zinc fingers. Science. 1993; 261(5129):1701-7. DOI: 10.1126/science.8378770. View