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Draft Genome Sequence of Streptomyces Clavuligerus NRRL 3585, a Producer of Diverse Secondary Metabolites

Overview
Journal J Bacteriol
Specialty Microbiology
Date 2010 Oct 5
PMID 20889745
Citations 32
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Abstract

Streptomyces clavuligerus is an important industrial strain that produces a number of antibiotics, including clavulanic acid and cephamycin C. A high-quality draft genome sequence of the S. clavuligerus NRRL 3585 strain was produced by employing a hybrid approach that involved Sanger sequencing, Roche/454 pyrosequencing, optical mapping, and partial finishing. Its genome, comprising four linear replicons, one chromosome, and four plasmids, carries numerous sets of genes involved in the biosynthesis of secondary metabolites, including a variety of antibiotics.

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References
1.
Delcher A, Bratke K, Powers E, Salzberg S . Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics. 2007; 23(6):673-9. PMC: 2387122. DOI: 10.1093/bioinformatics/btm009. View

2.
Wu X, Roy K . Complete nucleotide sequence of a linear plasmid from Streptomyces clavuligerus and characterization of its RNA transcripts. J Bacteriol. 1993; 175(1):37-52. PMC: 196095. DOI: 10.1128/jb.175.1.37-52.1993. View

3.
Salas J, Mendez C . Indolocarbazole antitumour compounds by combinatorial biosynthesis. Curr Opin Chem Biol. 2009; 13(2):152-60. DOI: 10.1016/j.cbpa.2009.02.003. View

4.
Nagarajan R, Boeck L, Gorman M, HAMILL R, HIGGENS C, HOEHN M . Beta-lactam antibiotics from Streptomyces. J Am Chem Soc. 1971; 93(9):2308-10. DOI: 10.1021/ja00738a035. View

5.
Badger J, Olsen G . CRITICA: coding region identification tool invoking comparative analysis. Mol Biol Evol. 1999; 16(4):512-24. DOI: 10.1093/oxfordjournals.molbev.a026133. View