» Articles » PMID: 20529727

A Coupled Global Registration and Segmentation Framework with Application to Magnetic Resonance Prostate Imagery

Overview
Date 2010 Jun 10
PMID 20529727
Citations 15
Authors
Affiliations
Soon will be listed here.
Abstract

Extracting the prostate from magnetic resonance (MR) imagery is a challenging and important task for medical image analysis and surgical planning. We present in this work a unified shape-based framework to extract the prostate from MR prostate imagery. In many cases, shape-based segmentation is a two-part problem. First, one must properly align a set of training shapes such that any variation in shape is not due to pose. Then segmentation can be performed under the constraint of the learnt shape. However, the general registration task of prostate shapes becomes increasingly difficult due to the large variations in pose and shape in the training sets, and is not readily handled through existing techniques. Thus, the contributions of this paper are twofold. We first explicitly address the registration problem by representing the shapes of a training set as point clouds. In doing so, we are able to exploit the more global aspects of registration via a certain particle filtering based scheme. In addition, once the shapes have been registered, a cost functional is designed to incorporate both the local image statistics as well as the learnt shape prior. We provide experimental results, which include several challenging clinical data sets, to highlight the algorithm's capability of robustly handling supine/prone prostate registration and the overall segmentation task.

Citing Articles

Global registration of kidneys in 3D ultrasound and CT images.

Ndzimbong W, Thome N, Fourniol C, Keeza Y, Sauer B, Marescaux J Int J Comput Assist Radiol Surg. 2024; 20(1):65-75.

PMID: 39242470 DOI: 10.1007/s11548-024-03255-3.


A novel approach for automatic segmentation of prostate and its lesion regions on magnetic resonance imaging.

Ren H, Ren C, Guo Z, Zhang G, Luo X, Ren Z Front Oncol. 2023; 13:1095353.

PMID: 37152013 PMC: 10154598. DOI: 10.3389/fonc.2023.1095353.


Patch-Based Label Fusion for Automatic Multi-Atlas-Based Prostate Segmentation in MR Images.

Yang X, Jani A, Rossi P, Mao H, Curran W, Liu T Proc SPIE Int Soc Opt Eng. 2019; 9786.

PMID: 31452561 PMC: 6710014. DOI: 10.1117/12.2216424.


Boundary-Weighted Domain Adaptive Neural Network for Prostate MR Image Segmentation.

Zhu Q, Du B, Yan P IEEE Trans Med Imaging. 2019; 39(3):753-763.

PMID: 31425022 PMC: 7015773. DOI: 10.1109/TMI.2019.2935018.


A Point Says a Lot: An Interactive Segmentation Method for MR Prostate via One-Point Labeling.

Sun J, Shi Y, Gao Y, Shen D Mach Learn Multimodal Interact. 2018; 10541:220-228.

PMID: 30345431 PMC: 6193503. DOI: 10.1007/978-3-319-67389-9_26.


References
1.
Tsai A, Yezzi Jr A, Wells W, Tempany C, Tucker D, Fan A . A shape-based approach to the segmentation of medical imagery using level sets. IEEE Trans Med Imaging. 2003; 22(2):137-54. DOI: 10.1109/TMI.2002.808355. View

2.
Wells 3rd W, Viola P, Atsumi H, Nakajima S, Kikinis R . Multi-modal volume registration by maximization of mutual information. Med Image Anal. 1996; 1(1):35-51. DOI: 10.1016/s1361-8415(01)80004-9. View

3.
Melonakos J, Pichon E, Angenent S, Tannenbaum A . Finsler active contours. IEEE Trans Pattern Anal Mach Intell. 2008; 30(3):412-23. PMC: 2796633. DOI: 10.1109/TPAMI.2007.70713. View

4.
Moghari M, Abolmaesumi P . Point-based rigid-body registration using an unscented Kalman filter. IEEE Trans Med Imaging. 2007; 26(12):1708-28. DOI: 10.1109/tmi.2007.901984. View

5.
Alterovitz R, Goldberg K, Pouliot J, Hsu I, Kim Y, Noworolski S . Registration of MR prostate images with biomechanical modeling and nonlinear parameter estimation. Med Phys. 2006; 33(2):446-54. DOI: 10.1118/1.2163391. View