Intramolecular Catalysis of Phosphodiester Hydrolysis by Two Imidazoles
Overview
Authors
Affiliations
Two imidazole groups act together to catalyze the hydrolysis of the phosphodiester bis(2-(1-methyl-1H-imidazolyl)phenyl) phosphate (BMIPP). A full investigation involving searching computational and electrospray ionization (ESI-MS-/MS) and ultra mass spectrometry (LTQ-FT) experiments made possible a choice between two kinetically equivalent mechanisms. The preferred pathway, involving intramolecular nucleophilic catalysis by imidazole, assisted by intramolecular general acid catalysis by the imidazolium group, offers the first simple model for the mechanism used by the extensive phospholipase D superfamily.
Wang X, Shu J, Ni T, Xu C, Xu B, Liu X J Biol Inorg Chem. 2023; 28(5):473-483.
PMID: 37140680 DOI: 10.1007/s00775-023-02000-6.
Short peptide-based cross-β amyloids exploit dual residues for phosphoesterase like activity.
Mahato C, Menon S, Singh A, Afrose S, Mondal J, Das D Chem Sci. 2022; 13(32):9225-9231.
PMID: 36092997 PMC: 9384705. DOI: 10.1039/d2sc03205h.
Dyrkheeva N, Anarbaev R, Lebedeva N, Kuprushkin M, Kuznetsova A, Kuznetsov N Front Cell Dev Biol. 2021; 8:604732.
PMID: 33425909 PMC: 7786179. DOI: 10.3389/fcell.2020.604732.
1-Carb-oxy-naphthalen-2-yl acetate monohydrate.
Souza B, J Bortoluzzi A, Nome F Acta Crystallogr Sect E Struct Rep Online. 2014; 70(Pt 2):o105.
PMID: 24764837 PMC: 3998276. DOI: 10.1107/S1600536813034338.
Phospholipase D: enzymology, functionality, and chemical modulation.
Selvy P, Lavieri R, Lindsley C, Brown H Chem Rev. 2011; 111(10):6064-119.
PMID: 21936578 PMC: 3233269. DOI: 10.1021/cr200296t.