Rapid Purification of Helicase Proteins and in Vitro Analysis of Helicase Activity
Overview
Authors
Affiliations
Most processes involving an organism's genetic material, including replication, repair and recombination, require access to single-stranded DNA as a template or reaction intermediate. To disrupt the hydrogen bonds between the two strands in double-stranded DNA, organisms utilize proteins called DNA helicases. DNA helicases use duplex DNA as a substrate to create single-stranded DNA in a reaction that requires ATP hydrolysis. Due to their critical role in cellular function, understanding the reaction catalyzed by helicases is essential to understanding DNA metabolism. Helicases are also important in many disease processes due to their role in DNA maintenance and replication. Here we discuss ways to rapidly purify helicases in sufficient quantity for biochemical analysis. We also briefly discuss potential substrates to use with helicases to establish some of their critical biochemical parameters. Through the use of methods that simplify the study of helicases, our understanding of these essential proteins can be accelerated.
Rapid, inexpensive, sequence-independent fluorescent labeling of phosphorothioate DNA.
Satusky M, Johnson C, Erie D Biophys J. 2023; 122(7):1211-1218.
PMID: 36793216 PMC: 10111259. DOI: 10.1016/j.bpj.2023.02.011.
Bianco P Methods. 2021; 204:348-360.
PMID: 34896247 PMC: 9534331. DOI: 10.1016/j.ymeth.2021.12.002.
The UvrD303 hyper-helicase exhibits increased processivity.
Meiners M, Tahmaseb K, Matson S J Biol Chem. 2014; 289(24):17100-10.
PMID: 24798324 PMC: 4059151. DOI: 10.1074/jbc.M114.565309.