Structure of Ristocetin A in Complex with a Bacterial Cell-wall Mimetic
Overview
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Antimicrobial drug resistance is a serious public health problem and the development of new antibiotics has become an important priority. Ristocetin A is a class III glycopeptide antibiotic that is used in the diagnosis of von Willebrand disease and which has served as a lead compound for the development of new antimicrobial therapeutics. The 1.0 A resolution crystal structure of the complex between ristocetin A and a bacterial cell-wall peptide has been determined. As is observed for most other glycopeptide antibiotics, it is shown that ristocetin A forms a back-to-back dimer containing concave binding pockets that recognize the cell-wall peptide. A comparison of the structure of ristocetin A with those of class I glycopeptide antibiotics such as vancomycin and balhimycin identifies differences in the details of dimerization and ligand binding. The structure of the ligand-binding site reveals a likely explanation for ristocetin A's unique anticooperativity between dimerization and ligand binding.
Code C, Qiu D, Solovyov I, Lee J, Shin H, Roland C J Am Chem Soc. 2023; 145(44):23925-23938.
PMID: 37883679 PMC: 10636759. DOI: 10.1021/jacs.3c04068.
Tackling Antibiotic Resistance with Compounds of Natural Origin: A Comprehensive Review.
Alvarez-Martinez F, Barrajon-Catalan E, Micol V Biomedicines. 2020; 8(10).
PMID: 33050619 PMC: 7601869. DOI: 10.3390/biomedicines8100405.
Substrate Tolerance of Bacterial Glycosyltransferase MurG: Novel Fluorescence-Based Assays.
Mitachi K, Yun H, Gillman C, Skorupinska-Tudek K, Swiezewska E, Clemons Jr W ACS Infect Dis. 2019; 6(6):1501-1516.
PMID: 31769280 PMC: 7286788. DOI: 10.1021/acsinfecdis.9b00242.
Total Syntheses of Vancomycin-Related Glycopeptide Antibiotics and Key Analogues.
Okano A, Isley N, Boger D Chem Rev. 2017; 117(18):11952-11993.
PMID: 28437097 PMC: 5617763. DOI: 10.1021/acs.chemrev.6b00820.
Anti-cooperative ligand binding and dimerisation in the glycopeptide antibiotic dalbavancin.
Cheng M, Ziora Z, Hansford K, Blaskovich M, Butler M, Cooper M Org Biomol Chem. 2014; 12(16):2568-75.
PMID: 24608916 PMC: 4082399. DOI: 10.1039/c3ob42428f.