Akirtava C, May G, McManus C
Nucleic Acids Res. 2025; 53(5).
PMID: 40071932
PMC: 11897887.
DOI: 10.1093/nar/gkaf165.
Duenas M, Craig R, Gallaher S, Moseley J, Merchant S
Proc Natl Acad Sci U S A. 2025; 122(9):e2417695122.
PMID: 40009642
PMC: 11892635.
DOI: 10.1073/pnas.2417695122.
Nour I, Mohanty S
Viruses. 2025; 16(12.
PMID: 39772272
PMC: 11728826.
DOI: 10.3390/v16121966.
Zhong Z, Li Y, Sun Q, Chen D
Comput Struct Biotechnol J. 2024; 23:3771-3779.
PMID: 39525088
PMC: 11550727.
DOI: 10.1016/j.csbj.2024.10.042.
Petrychenko V, Yi S, Liedtke D, Peng B, Rodnina M, Fischer N
Nat Struct Mol Biol. 2024; 32(1):62-72.
PMID: 39289545
PMC: 11746136.
DOI: 10.1038/s41594-024-01378-4.
Understanding the regulation of protein synthesis under stress conditions.
Irshad I, Sharma A
Biophys J. 2024; 123(20):3627-3639.
PMID: 39277792
PMC: 11494521.
DOI: 10.1016/j.bpj.2024.09.014.
Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae.
Duenas M, Craig R, Gallaher S, Moseley J, Merchant S
bioRxiv. 2024; .
PMID: 39091764
PMC: 11291117.
DOI: 10.1101/2024.07.24.605010.
Deciphering the -regulatory landscape of natural yeast Transcript Leaders.
Akirtava C, May G, McManus C
bioRxiv. 2024; .
PMID: 39005336
PMC: 11245039.
DOI: 10.1101/2024.07.03.601937.
A novel reporter for helicase activity in translation uncovers DDX3X interactions.
Wilkins K, Schroeder T, Gu S, Revalde J, Floor S
RNA. 2024; 30(8):1041-1057.
PMID: 38697667
PMC: 11251518.
DOI: 10.1261/rna.079837.123.
Comprehensive genomic analysis of the SARS-CoV-2 Omicron variant BA.2.76 in Jining City, China, 2022.
Yin Q, Liu W, Jiang Y, Feng Q, Wang X, Dou H
BMC Genomics. 2024; 25(1):378.
PMID: 38632523
PMC: 11022347.
DOI: 10.1186/s12864-024-10246-w.
Representing and extracting knowledge from single-cell data.
Mihai I, Chafle S, Henriksson J
Biophys Rev. 2024; 16(1):29-56.
PMID: 38495441
PMC: 10937862.
DOI: 10.1007/s12551-023-01091-4.
An upstream open reading frame (5'-uORF) links oxidative stress to translational control of ALCAT1 through phosphorylation of eIF2α.
Zhang J, Shi Y
Free Radic Biol Med. 2024; 214:129-136.
PMID: 38360278
PMC: 11798684.
DOI: 10.1016/j.freeradbiomed.2024.02.015.
Functional analysis of the AUG initiator codon context reveals novel conserved sequences that disfavor mRNA translation in eukaryotes.
Hernandez G, Garcia A, Weingarten-Gabbay S, Mishra R, Hussain T, Amiri M
Nucleic Acids Res. 2023; 52(3):1064-1079.
PMID: 38038264
PMC: 10853783.
DOI: 10.1093/nar/gkad1152.
Translational regulation by uORFs and start codon selection stringency.
Dever T, Ivanov I, Hinnebusch A
Genes Dev. 2023; 37(11-12):474-489.
PMID: 37433636
PMC: 10393191.
DOI: 10.1101/gad.350752.123.
Bursting translation on single mRNAs in live cells.
Livingston N, Kwon J, Valera O, Saba J, Sinha N, Reddy P
Mol Cell. 2023; 83(13):2276-2289.e11.
PMID: 37329884
PMC: 10330622.
DOI: 10.1016/j.molcel.2023.05.019.
Unraveling the influences of sequence and position on yeast uORF activity using massively parallel reporter systems and machine learning.
May G, Akirtava C, Agar-Johnson M, Micic J, Woolford J, McManus J
Elife. 2023; 12.
PMID: 37227054
PMC: 10259493.
DOI: 10.7554/eLife.69611.
Molecular rearrangements in S6 during slow inactivation in Shaker-IR potassium channels.
Szanto T, Papp F, Zakany F, Varga Z, Deutsch C, Panyi G
J Gen Physiol. 2023; 155(7).
PMID: 37212728
PMC: 10202832.
DOI: 10.1085/jgp.202313352.
Evolution and implications of de novo genes in humans.
Broeils L, Ruiz-Orera J, Snel B, Hubner N, van Heesch S
Nat Ecol Evol. 2023; 7(6):804-815.
PMID: 36928843
DOI: 10.1038/s41559-023-02014-y.
Translation reinitiation after uORFs does not fully protect mRNAs from nonsense-mediated decay.
Russell P, Slivka J, Boyle E, Burghes A, Kearse M
RNA. 2023; 29(6):735-744.
PMID: 36878710
PMC: 10187673.
DOI: 10.1261/rna.079525.122.
Promoter activity and transcriptome analyses decipher functions of CgbHLH001 gene (Chenopodium glaucum L.) in response to abiotic stress.
Zhou Z, Wang J, Yu Q, Lan H
BMC Plant Biol. 2023; 23(1):116.
PMID: 36849913
PMC: 9969703.
DOI: 10.1186/s12870-023-04128-8.
