» Articles » PMID: 19363495

Enzymatic Assembly of DNA Molecules Up to Several Hundred Kilobases

Overview
Journal Nat Methods
Date 2009 Apr 14
PMID 19363495
Citations 4697
Authors
Affiliations
Soon will be listed here.
Abstract

We describe an isothermal, single-reaction method for assembling multiple overlapping DNA molecules by the concerted action of a 5' exonuclease, a DNA polymerase and a DNA ligase. First we recessed DNA fragments, yielding single-stranded DNA overhangs that specifically annealed, and then covalently joined them. This assembly method can be used to seamlessly construct synthetic and natural genes, genetic pathways and entire genomes, and could be a useful molecular engineering tool.

Citing Articles

Phototropin connects blue light perception to starch metabolism in green algae.

Yuan Y, Iannetta A, Kim M, Sadecki P, Arend M, Tsichla A Nat Commun. 2025; 16(1):2545.

PMID: 40087266 DOI: 10.1038/s41467-025-57809-3.


Towards the first synthetic eukaryotic cell.

Xu W, Teng Y, Zhou S Biosaf Health. 2025; 6(6):376-382.

PMID: 40078978 PMC: 11895034. DOI: 10.1016/j.bsheal.2024.11.001.


Development of a Dihydrofolate Reductase Selection System for .

Yu H, Nyasae L, Lee R, Lu W, So E, Feng H Int J Mol Sci. 2025; 26(5).

PMID: 40076696 PMC: 11899850. DOI: 10.3390/ijms26052073.


Insight into crRNA Processing in P42S and Application of SmutCas9 in Genome Editing.

Mosterd C, Moineau S Int J Mol Sci. 2025; 26(5).

PMID: 40076628 PMC: 11900481. DOI: 10.3390/ijms26052005.


Mechanistic basis for PYROXD1-mediated protection of the human tRNA ligase complex against oxidative inactivation.

Loeff L, Kroupova A, Asanovic I, Boneberg F, Pfleiderer M, Riermeier L Nat Struct Mol Biol. 2025; .

PMID: 40069351 DOI: 10.1038/s41594-025-01516-6.


References
1.
Sayers J, Eckstein F . Properties of overexpressed phage T5 D15 exonuclease. Similarities with Escherichia coli DNA polymerase I 5'-3' exonuclease. J Biol Chem. 1990; 265(30):18311-7. View

2.
Horton R, Cai Z, Ho S, Pease L . Gene splicing by overlap extension: tailor-made genes using the polymerase chain reaction. Biotechniques. 1990; 8(5):528-35. View

3.
Lartigue C, Duret S, Garnier M, Renaudin J . New plasmid vectors for specific gene targeting in Spiroplasma citri. Plasmid. 2002; 48(2):149-59. DOI: 10.1016/s0147-619x(02)00121-x. View

4.
Smith H, WILCOX K . A restriction enzyme from Hemophilus influenzae. I. Purification and general properties. J Mol Biol. 1970; 51(2):379-91. DOI: 10.1016/0022-2836(70)90149-x. View

5.
Yount B, Denison M, Weiss S, Baric R . Systematic assembly of a full-length infectious cDNA of mouse hepatitis virus strain A59. J Virol. 2002; 76(21):11065-78. PMC: 136593. DOI: 10.1128/jvi.76.21.11065-11078.2002. View