Distinct Mode of Interaction of a Novel Ketolide Antibiotic That Displays Enhanced Antimicrobial Activity
Overview
Affiliations
Ketolides represent the latest generation of macrolide antibiotics, displaying improved activities against some erythromycin-resistant strains, while maintaining their activity against erythromycin-susceptible ones. In this study, we present a new ketolide, K-1325, that carries an alkyl-aryl side chain at C-13 of the lactone ring. According to our genetic and biochemical studies, K-1325 binds within the nascent polypeptide exit tunnel, at a site previously described as the primary attachment site of all macrolide antibiotics. Compared with telithromycin, K-1325 displays enhanced antimicrobial activity against wild-type Escherichia coli strains, as well as against strains bearing the U2609C mutation in 23S rRNA. Chemical protection experiments showed that the alkyl-aryl side chain of K-1325 interacts specifically with helix 35 of 23S rRNA, a fact leading to an increased affinity of U2609C mutant ribosomes for the drug and rationalizing the enhanced effectiveness of this new ketolide.
Davoodi S, Daryaee F, Chang A, Walker S, Tonge P ACS Infect Dis. 2020; 6(4):629-636.
PMID: 32011855 PMC: 7150629. DOI: 10.1021/acsinfecdis.9b00484.
The macrolide antibiotic renaissance.
Dinos G Br J Pharmacol. 2017; 174(18):2967-2983.
PMID: 28664582 PMC: 5573421. DOI: 10.1111/bph.13936.
Recent Advances in the Rational Design and Optimization of Antibacterial Agents.
Jones J, Virga K, Gumina G, Hevener K Medchemcomm. 2016; 7(9):1694-1715.
PMID: 27642504 PMC: 5025264. DOI: 10.1039/C6MD00232C.
Krokidis M, Marquez V, Wilson D, Kalpaxis D, Dinos G Antimicrob Agents Chemother. 2013; 58(1):472-80.
PMID: 24189263 PMC: 3910732. DOI: 10.1128/AAC.01994-13.
Harvey C, Puglisi J, Pande V, Cane D, Khosla C J Am Chem Soc. 2012; 134(29):12259-65.
PMID: 22741553 PMC: 3405186. DOI: 10.1021/ja304682q.