» Articles » PMID: 18061481

Intrinsic and Extrinsic Analysis in Computational Anatomy

Overview
Journal Neuroimage
Specialty Radiology
Date 2007 Dec 7
PMID 18061481
Citations 10
Authors
Affiliations
Soon will be listed here.
Abstract

We present intrinsic and extrinsic methods for studying anatomical coordinates in order to perform statistical inference on random physiological signals F across clinical populations. In both intrinsic and extrinsic methods, we introduce generalized partition functions of the coordinates, psi(x), x epsilon M, which are used to construct a random field of F on M as statistical model. In the intrinsic analysis, such partition functions are built intrinsically for individual anatomical coordinate based on Courant's theorem on nodal analysis via self-adjoint linear elliptic differential operators. In contrast, the extrinsic method needs only one set of partition functions for a template coordinate system, and then applies to each anatomical coordinate system via diffeomorphic transformation. For illustration, we apply both intrinsic and extrinsic methods to a clinical study: cortical thickness variation of the left cingulate gyrus in schizophrenia. Both methods show that the left cingulate gyrus tends to become thinner in schizophrenia relative to the healthy control population. However, the intrinsic method increases the statistical power.

Citing Articles

Geometric influences on the regional organization of the mammalian brain.

Pang J, Robinson P, Aquino K, Levi P, Holmes A, Markicevic M bioRxiv. 2025; .

PMID: 39975401 PMC: 11838429. DOI: 10.1101/2025.01.30.635820.


Computational analysis of LDDMM for brain mapping.

Ceritoglu C, Tang X, Chow M, Hadjiabadi D, Shah D, Brown T Front Neurosci. 2013; 7:151.

PMID: 23986653 PMC: 3753595. DOI: 10.3389/fnins.2013.00151.


DIFFEOMORPHIC ACTIVE CONTOURS.

Arrate F, Ratnanather J, Younes L SIAM J Imaging Sci. 2010; 3(2):176-198.

PMID: 20814568 PMC: 2929989. DOI: 10.1137/090766401.


Laplace-Beltrami Eigenvalues and Topological Features of Eigenfunctions for Statistical Shape Analysis.

Reuter M, Wolter F, Shenton M, Niethammer M Comput Aided Des. 2010; 41(10):739-755.

PMID: 20161035 PMC: 2753296. DOI: 10.1016/j.cad.2009.02.007.


Atlas generation for subcortical and ventricular structures with its applications in shape analysis.

Qiu A, Brown T, Fischl B, Ma J, Miller M IEEE Trans Image Process. 2010; 19(6):1539-47.

PMID: 20129863 PMC: 2909363. DOI: 10.1109/TIP.2010.2042099.