Nucleosome Destabilization in the Epigenetic Regulation of Gene Expression
Overview
Authors
Affiliations
Assembly, mobilization and disassembly of nucleosomes can influence the regulation of gene expression and other processes that act on eukaryotic DNA. Distinct nucleosome-assembly pathways deposit dimeric subunits behind the replication fork or at sites of active processes that mobilize pre-existing nucleosomes. Replication-coupled nucleosome assembly appears to be the default process that maintains silent chromatin, counteracted by active processes that destabilize nucleosomes. Nucleosome stability is regulated by the combined effects of nucleosome-positioning sequences, histone chaperones, ATP-dependent nucleosome remodellers, post-translational modifications and histone variants. Recent studies suggest that histone turnover helps to maintain continuous access to sequence-specific DNA-binding proteins that regulate epigenetic inheritance, providing a dynamic alternative to histone-marking models for the propagation of active chromatin.
Li Z, Ma Y, Nan X, Dong H, Tang J, Yin S Appl Microbiol Biotechnol. 2024; 108(1):542.
PMID: 39718572 PMC: 11668828. DOI: 10.1007/s00253-024-13376-z.
Functional Characterization of Accessible Chromatin in Common Wheat.
Zheng D, Lin K, Yang X, Zhang W, Cheng X Int J Mol Sci. 2024; 25(17).
PMID: 39273331 PMC: 11395023. DOI: 10.3390/ijms25179384.
Multi-omic characterization of allele-specific regulatory variation in hybrid pigs.
Quan J, Yang M, Wang X, Cai G, Ding R, Zhuang Z Nat Commun. 2024; 15(1):5587.
PMID: 38961076 PMC: 11222378. DOI: 10.1038/s41467-024-49923-5.
Histone oxidation as a new mechanism of metabolic control over gene expression.
Gantner B, Palma F, Kayzuka C, Lacchini R, Foltz D, Backman V Trends Genet. 2024; 40(9):739-746.
PMID: 38910033 PMC: 11387142. DOI: 10.1016/j.tig.2024.05.012.
Leduque B, Edera A, Vitte C, Quadrana L Nucleic Acids Res. 2024; 52(11):6285-6297.
PMID: 38676941 PMC: 11194078. DOI: 10.1093/nar/gkae306.