» Articles » PMID: 17535894

Internal DNA Pressure Modifies Stability of WT Phage

Overview
Specialty Science
Date 2007 May 31
PMID 17535894
Citations 63
Authors
Affiliations
Soon will be listed here.
Abstract

dsDNA in bacteriophages is highly stressed and exerts internal pressures of many atmospheres (1 atm = 101.3 kPa) on the capsid walls. We investigate the correlation between packaged DNA length in lambda phage (78-100% of WT DNA) and capsid strength by using an atomic force microscope indentation technique. We show that phages with WT DNA are twice as strong as shorter genome mutants, which behave like empty capsids, regardless of high internal pressure. Our analytical model of DNA-filled capsid deformation shows that, because of DNA-hydrating water molecules, an osmotic pressure exists inside capsids that increases exponentially when the packaged DNA density is close to WT phage. This osmotic pressure raises the WT capsid strength and is approximately equal to the maximum breaking force of empty shells. This result suggests that the strength of the shells limits the maximal packaged genome length. Moreover, it implies an evolutionary optimization of WT phages allowing them to survive greater external mechanical stresses in nature.

Citing Articles

Enterovirus-like particles encapsidate RNA and exhibit decreased stability due to lack of maturation.

Kuijpers L, Giannopoulou E, Feng Y, van den Braak W, Freydoonian A, Ramlal R PLoS Pathog. 2025; 21(2):e1012873.

PMID: 39903789 PMC: 11793780. DOI: 10.1371/journal.ppat.1012873.


Nanomechanical resilience and thermal stability of RSJ2 phage.

Sae-Ueng U, Bunsuwansakul C, Showpanish K, Phironrit N, Thadajarassiri J, Nehls C Sci Rep. 2024; 14(1):19389.

PMID: 39169068 PMC: 11339380. DOI: 10.1038/s41598-024-70056-8.


Surface Cross-Linking by Macromolecular Tethers Enhances Virus-like Particles' Resilience to Mucosal Stress Factors.

Ali A, Ganguillet S, Turgay Y, Keys T, Causa E, Fradique R ACS Nano. 2024; 18(4):3382-3396.

PMID: 38237058 PMC: 10832050. DOI: 10.1021/acsnano.3c10339.


'SAXS-osmometer' method provides measurement of DNA pressure in viral capsids and delivers an empirical equation of state.

Villanueva Valencia J, Li D, Casjens S, Evilevitch A Nucleic Acids Res. 2023; 51(21):11415-11427.

PMID: 37889048 PMC: 10681747. DOI: 10.1093/nar/gkad852.


Reconstituted virus-nucleus system reveals mechanics of herpesvirus genome uncoating.

Evilevitch A, Tsimtsirakis E QRB Discov. 2023; 3:e2.

PMID: 37529281 PMC: 10392623. DOI: 10.1017/qrd.2021.14.


References
1.
Kindt J, Tzlil S, Ben-Shaul A, Gelbart W . DNA packaging and ejection forces in bacteriophage. Proc Natl Acad Sci U S A. 2001; 98(24):13671-4. PMC: 61099. DOI: 10.1073/pnas.241486298. View

2.
Smith D, Tans S, Smith S, Grimes S, Anderson D, Bustamante C . The bacteriophage straight phi29 portal motor can package DNA against a large internal force. Nature. 2001; 413(6857):748-52. DOI: 10.1038/35099581. View

3.
Thomas W, Trintchina E, Forero M, Vogel V, Sokurenko E . Bacterial adhesion to target cells enhanced by shear force. Cell. 2002; 109(7):913-23. DOI: 10.1016/s0092-8674(02)00796-1. View

4.
Tzlil S, Kindt J, Gelbart W, Ben-Shaul A . Forces and pressures in DNA packaging and release from viral capsids. Biophys J. 2003; 84(3):1616-27. PMC: 1302732. DOI: 10.1016/S0006-3495(03)74971-6. View

5.
Purohit P, Kondev J, Phillips R . Mechanics of DNA packaging in viruses. Proc Natl Acad Sci U S A. 2003; 100(6):3173-8. PMC: 404299. DOI: 10.1073/pnas.0737893100. View