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Functional DNAzymes Organized into Two-dimensional Arrays

Overview
Journal Nano Lett
Specialty Biotechnology
Date 2006 Jul 13
PMID 16834439
Citations 11
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Abstract

DNAzymes are catalytically active DNA molecules, which have previously been described in solution. Here, we organize these molecules into a series of two-dimensional (2D) arrays using a periodic arrangement of DNA structures based on the DNA double crossover motif. We demonstrate by means of atomic force microscopy that the DNAzymes are organized according to the design and that they retain their activity when attached in linear strings within the context of the 2D array.

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References
1.
Li J, Zheng W, Kwon A, Lu Y . In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme. Nucleic Acids Res. 1999; 28(2):481-8. PMC: 102519. DOI: 10.1093/nar/28.2.481. View

2.
Breaker R, Joyce G . A DNA enzyme with Mg(2+)-dependent RNA phosphoesterase activity. Chem Biol. 1995; 2(10):655-60. DOI: 10.1016/1074-5521(95)90028-4. View

3.
Li Y, Breaker R . In vitro selection of kinase and ligase deoxyribozymes. Methods. 2001; 23(2):179-90. DOI: 10.1006/meth.2000.1119. View

4.
Cohen S, Chang A, Boyer H, Helling R . Construction of biologically functional bacterial plasmids in vitro. Proc Natl Acad Sci U S A. 1973; 70(11):3240-4. PMC: 427208. DOI: 10.1073/pnas.70.11.3240. View

5.
Asahina Y, Ito Y, Wu C, Wu G . DNA ribonucleases that are active against intracellular hepatitis B viral RNA targets. Hepatology. 1998; 28(2):547-54. DOI: 10.1002/hep.510280236. View