Viswanathan R, Carroll M, Roffe A, Fajardo J, Fiser A
Bioinformatics. 2024; 40(10).
PMID: 39271143
PMC: 11453099.
DOI: 10.1093/bioinformatics/btae556.
Negi S, Schein C, Braun W
J Allergy Clin Immunol Glob. 2023; 2(4):100162.
PMID: 37781674
PMC: 10509899.
DOI: 10.1016/j.jacig.2023.100162.
Kumar N, Bajiya N, Patiyal S, Raghava G
Protein Sci. 2023; 32(11):e4785.
PMID: 37733481
PMC: 10578127.
DOI: 10.1002/pro.4785.
Lopez-Pedrouso M, Lorenzo J, de Dios Alche J, Moreira R, Franco D
Biology (Basel). 2023; 12(5).
PMID: 37237526
PMC: 10215886.
DOI: 10.3390/biology12050714.
Li L, Zhao Z, Yang X, Su Z, Li W, Chen S
Adv Sci (Weinh). 2023; 10(20):e2207474.
PMID: 37162232
PMC: 10369230.
DOI: 10.1002/advs.202207474.
A subtractive proteomics approach for the identification of immunodominant vaccine candidate proteins.
Acar M, Ayaz-Guner S, Guner H, Dinc G, Kilic A, Doganay M
Front Immunol. 2022; 13:1001633.
PMID: 36439128
PMC: 9687788.
DOI: 10.3389/fimmu.2022.1001633.
Compilation of parasitic immunogenic proteins from 30 years of published research using machine learning and natural language processing.
Goodswen S, Kennedy P, Ellis J
Sci Rep. 2022; 12(1):10349.
PMID: 35725870
PMC: 9208253.
DOI: 10.1038/s41598-022-13790-1.
Vaccines and Immunoinformatics for Vaccine Design.
Joon S, Singla R, Shen B
Adv Exp Med Biol. 2022; 1368:95-110.
PMID: 35594022
DOI: 10.1007/978-981-16-8969-7_5.
Towards the prediction of non-peptidic epitopes.
Zierep P, Vita R, Blazeska N, Moumbock A, Greenbaum J, Peters B
PLoS Comput Biol. 2022; 18(2):e1009151.
PMID: 35180214
PMC: 8893639.
DOI: 10.1371/journal.pcbi.1009151.
Immunoinformatics prediction of potential immunodominant epitopes from human coronaviruses and association with autoimmunity.
Mathew S, Fakhroo A, Smatti M, Al Thani A, Yassine H
Immunogenetics. 2022; 74(2):213-229.
PMID: 35006282
PMC: 8744044.
DOI: 10.1007/s00251-021-01250-5.
Engineering of Cytolethal Distending Toxin B by Its Reducing Immunogenicity and Maintaining Stability as a New Drug Candidate for Tumor Therapy; an In Silico Study.
Keshtvarz M, Mahboobi M, Kieliszek M, Miecznikowski A, Sedighian H, Rezaei M
Toxins (Basel). 2021; 13(11).
PMID: 34822569
PMC: 8624547.
DOI: 10.3390/toxins13110785.
Mechanisms of Immunotoxicity: Stressors and Evaluators.
Zerdan M, Moussa S, Atoui A, Assi H
Int J Mol Sci. 2021; 22(15).
PMID: 34361007
PMC: 8348050.
DOI: 10.3390/ijms22158242.
Allele-Specific Thresholds of Eluted Ligands for T-Cell Epitope Prediction.
Reardon B, Kosaloglu-Yalcin Z, Paul S, Peters B, Sette A
Mol Cell Proteomics. 2021; 20:100122.
PMID: 34303001
PMC: 8724920.
DOI: 10.1016/j.mcpro.2021.100122.
Immuno-informatics design of a multimeric epitope peptide based vaccine targeting SARS-CoV-2 spike glycoprotein.
Chukwudozie O, Gray C, Fagbayi T, Chukwuanukwu R, Oyebanji V, Bankole T
PLoS One. 2021; 16(3):e0248061.
PMID: 33730022
PMC: 7968690.
DOI: 10.1371/journal.pone.0248061.
Deimmunization of protein therapeutics - Recent advances in experimental and computational epitope prediction and deletion.
Zinsli L, Stierlin N, Loessner M, Schmelcher M
Comput Struct Biotechnol J. 2021; 19:315-329.
PMID: 33425259
PMC: 7779837.
DOI: 10.1016/j.csbj.2020.12.024.
T and B cell Epitope analysis of SARS-CoV-2 S protein based on immunoinformatics and experimental research.
Chen Z, Ruan P, Wang L, Nie X, Ma X, Tan Y
J Cell Mol Med. 2020; 25(2):1274-1289.
PMID: 33325143
PMC: 7812294.
DOI: 10.1111/jcmm.16200.
Attenuated Subcomponent Vaccine Design Targeting the SARS-CoV-2 Nucleocapsid Phosphoprotein RNA Binding Domain: Analysis.
Chukwudozie O, Chukwuanukwu R, Iroanya O, Eze D, Duru V, Dele-Alimi T
J Immunol Res. 2020; 2020:2837670.
PMID: 32964056
PMC: 7501546.
DOI: 10.1155/2020/2837670.
Epitope-based peptide vaccines predicted against novel coronavirus disease caused by SARS-CoV-2.
Lin L, Ting S, Yufei H, Wendong L, Yubo F, Jing Z
Virus Res. 2020; 288:198082.
PMID: 32621841
PMC: 7328648.
DOI: 10.1016/j.virusres.2020.198082.
A behind-the-scenes tour of the IEDB curation process: an optimized process empirically integrating automation and human curation efforts.
Salimi N, Edwards L, Foos G, Greenbaum J, Martini S, Reardon B
Immunology. 2020; 161(2):139-147.
PMID: 32615639
PMC: 7496777.
DOI: 10.1111/imm.13234.
Genomic Sequencing and Analysis of Eight Camel-Derived Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Isolates in Saudi Arabia.
Al-Shomrani B, Manee M, Alharbi S, Altammami M, Alshehri M, Nassar M
Viruses. 2020; 12(6).
PMID: 32503352
PMC: 7354450.
DOI: 10.3390/v12060611.
