Phizicky E, Hopper A
RNA. 2023; 29(7):898-957.
PMID: 37055150
PMC: 10275265.
DOI: 10.1261/rna.079620.123.
Lawrimore C, Bloom K
Genes (Basel). 2019; 10(12).
PMID: 31835574
PMC: 6947172.
DOI: 10.3390/genes10121029.
Cerqueira A, Lemos B
Trends Genet. 2019; 35(10):710-723.
PMID: 31447250
PMC: 8487316.
DOI: 10.1016/j.tig.2019.07.011.
Trotta E
J Biol Chem. 2019; 294(33):12349-12358.
PMID: 31235518
PMC: 6699833.
DOI: 10.1074/jbc.RA119.008529.
Nossmann M, Pieper J, Hillmann F, Brakhage A, Munder T
Curr Genet. 2017; 64(3):589-598.
PMID: 29098364
DOI: 10.1007/s00294-017-0774-8.
Subnuclear distribution of proteins: Links with genome architecture.
Shah F, Bhat Y, Wani A
Nucleus. 2017; 9(1):42-55.
PMID: 28910577
PMC: 5973252.
DOI: 10.1080/19491034.2017.1361578.
Aggregation of Mod5 is affected by tRNA binding with implications for tRNA gene-mediated silencing.
Read D, Waller T, Tse E, Southworth D, Engelke D, Smaldino P
FEBS Lett. 2017; 591(11):1601-1610.
PMID: 28303570
PMC: 5468478.
DOI: 10.1002/1873-3468.12627.
Heterogeneous Spatial Distribution of Transcriptional Activity in Budding Yeast Nuclei.
Tokuda N, Sasai M
Biophys J. 2017; 112(3):491-504.
PMID: 28040197
PMC: 5300786.
DOI: 10.1016/j.bpj.2016.11.3201.
Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.
Pontvianne F, Carpentier M, Durut N, Pavlistova V, Jaske K, Schorova S
Cell Rep. 2016; 16(6):1574-1587.
PMID: 27477271
PMC: 5279810.
DOI: 10.1016/j.celrep.2016.07.016.
RNA Polymerase III Advances: Structural and tRNA Functional Views.
Arimbasseri A, Maraia R
Trends Biochem Sci. 2016; 41(6):546-559.
PMID: 27068803
PMC: 4884153.
DOI: 10.1016/j.tibs.2016.03.003.
The yeast genome undergoes significant topological reorganization in quiescence.
Rutledge M, Russo M, Belton J, Dekker J, Broach J
Nucleic Acids Res. 2015; 43(17):8299-313.
PMID: 26202961
PMC: 4787801.
DOI: 10.1093/nar/gkv723.
Argonaute 2 Binds Directly to tRNA Genes and Promotes Gene Repression in cis.
Woolnough J, Atwood B, Giles K
Mol Cell Biol. 2015; 35(13):2278-94.
PMID: 25918241
PMC: 4456445.
DOI: 10.1128/MCB.00076-15.
The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?.
OSullivan J, Pai D, Cridge A, Engelke D, Ganley A
Biomol Concepts. 2014; 4(3):277-86.
PMID: 25436580
PMC: 5100006.
DOI: 10.1515/bmc-2012-0043.
A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability.
Cahyani I, Cridge A, Engelke D, Ganley A, OSullivan J
Mol Cell Biol. 2014; 35(3):544-54.
PMID: 25421713
PMC: 4285424.
DOI: 10.1128/MCB.01249-14.
The cytoplasmic and nuclear populations of the eukaryote tRNA-isopentenyl transferase have distinct functions with implications in human cancer.
Smaldino P, Read D, Pratt-Hyatt M, Hopper A, Engelke D
Gene. 2014; 556(1):13-8.
PMID: 25261850
PMC: 4272631.
DOI: 10.1016/j.gene.2014.09.049.
RNAs nonspecifically inhibit RNA polymerase II by preventing binding to the DNA template.
Pai D, Kaplan C, Kweon H, Murakami K, Andrews P, Engelke D
RNA. 2014; 20(5):644-55.
PMID: 24614752
PMC: 3988566.
DOI: 10.1261/rna.040444.113.
Mod5 protein binds to tRNA gene complexes and affects local transcriptional silencing.
Pratt-Hyatt M, Pai D, Haeusler R, Wozniak G, Good P, Miller E
Proc Natl Acad Sci U S A. 2013; 110(33):E3081-9.
PMID: 23898186
PMC: 3746885.
DOI: 10.1073/pnas.1219946110.
Genome-wide analysis of functional sirtuin chromatin targets in yeast.
Li M, Valsakumar V, Poorey K, Bekiranov S, Smith J
Genome Biol. 2013; 14(5):R48.
PMID: 23710766
PMC: 4053722.
DOI: 10.1186/gb-2013-14-5-r48.
Silencing near tRNA genes is nucleosome-mediated and distinct from boundary element function.
Good P, Kendall A, Ignatz-Hoover J, Miller E, Pai D, Rivera S
Gene. 2013; 526(1):7-15.
PMID: 23707796
PMC: 3745993.
DOI: 10.1016/j.gene.2013.05.016.
Structure and function in the budding yeast nucleus.
Taddei A, Gasser S
Genetics. 2012; 192(1):107-29.
PMID: 22964839
PMC: 3430528.
DOI: 10.1534/genetics.112.140608.