Tang L, Tam N, Lam W, Lee T, Xu S, Lee C
Plant Mol Biol. 2024; 114(6):114.
PMID: 39432142
DOI: 10.1007/s11103-024-01511-3.
Novak Vanclova A, Nef C, Fussy Z, Vancl A, Liu F, Bowler C
EMBO Rep. 2024; 25(4):1859-1885.
PMID: 38499810
PMC: 11014865.
DOI: 10.1038/s44319-024-00103-y.
He J, Huang Y, Li L, Lin S, Ma M, Wang Y
Genome Biol Evol. 2023; 16(1).
PMID: 38155596
PMC: 10781511.
DOI: 10.1093/gbe/evad237.
Matsuo E, Morita K, Nakayama T, Yazaki E, Sarai C, Takahashi K
Front Plant Sci. 2022; 13:918543.
PMID: 35898209
PMC: 9309888.
DOI: 10.3389/fpls.2022.918543.
Geffroy S, Lechat M, Le Gac M, Rovillon G, Marie D, Bigeard E
Front Microbiol. 2021; 12:613199.
PMID: 33717003
PMC: 7944994.
DOI: 10.3389/fmicb.2021.613199.
Correlation between Organelle Genetic Variation and RNA Editing in Dinoflagellates Associated with the Coral Acropora digitifera.
Shoguchi E, Yoshioka Y, Shinzato C, Arimoto A, Bhattacharya D, Satoh N
Genome Biol Evol. 2020; 12(3):203-209.
PMID: 32108224
PMC: 7144361.
DOI: 10.1093/gbe/evaa042.
Small Genomes and Big Data: Adaptation of Plastid Genomics to the High-Throughput Era.
Klinger C, Richardson E
Biomolecules. 2019; 9(8).
PMID: 31344945
PMC: 6723049.
DOI: 10.3390/biom9080299.
Plastid Transcript Editing across Dinoflagellate Lineages Shows Lineage-Specific Application but Conserved Trends.
Klinger C, Paoli L, Newby R, Wang M, Carroll H, Leblond J
Genome Biol Evol. 2018; 10(4):1019-1038.
PMID: 29617800
PMC: 5888634.
DOI: 10.1093/gbe/evy057.
Condition-specific RNA editing in the coral symbiont Symbiodinium microadriaticum.
Liew Y, Li Y, Baumgarten S, Voolstra C, Aranda M
PLoS Genet. 2017; 13(2):e1006619.
PMID: 28245292
PMC: 5357065.
DOI: 10.1371/journal.pgen.1006619.
Deep Transcriptome Sequencing of Two Green Algae, Chara vulgaris and Chlamydomonas reinhardtii, Provides No Evidence of Organellar RNA Editing.
Cahoon A, Nauss J, Stanley C, Qureshi A
Genes (Basel). 2017; 8(2).
PMID: 28230734
PMC: 5333069.
DOI: 10.3390/genes8020080.
Transcripts in the Plasmodium Apicoplast Undergo Cleavage at tRNAs and Editing, and Include Antisense Sequences.
Nisbet R, Kurniawan D, Bowers H, Howe C
Protist. 2016; 167(4):377-388.
PMID: 27458998
PMC: 4995348.
DOI: 10.1016/j.protis.2016.06.003.
Full transcription of the chloroplast genome in photosynthetic eukaryotes.
Shi C, Wang S, Xia E, Jiang J, Zeng F, Gao L
Sci Rep. 2016; 6:30135.
PMID: 27456469
PMC: 4960489.
DOI: 10.1038/srep30135.
Diversity of transcripts and transcript processing forms in plastids of the dinoflagellate alga Karenia mikimotoi.
Dorrell R, Hinksman G, Howe C
Plant Mol Biol. 2016; 90(3):233-47.
PMID: 26768263
PMC: 4717168.
DOI: 10.1007/s11103-015-0408-9.
Integration of plastids with their hosts: Lessons learned from dinoflagellates.
Dorrell R, Howe C
Proc Natl Acad Sci U S A. 2015; 112(33):10247-54.
PMID: 25995366
PMC: 4547248.
DOI: 10.1073/pnas.1421380112.
A genomic approach to coral-dinoflagellate symbiosis: studies of Acropora digitifera and Symbiodinium minutum.
Shinzato C, Mungpakdee S, Satoh N, Shoguchi E
Front Microbiol. 2014; 5:336.
PMID: 25071748
PMC: 4083563.
DOI: 10.3389/fmicb.2014.00336.
Genome-wide transcript profiling reveals the coevolution of plastid gene sequences and transcript processing pathways in the fucoxanthin dinoflagellate Karlodinium veneficum.
Richardson E, Dorrell R, Howe C
Mol Biol Evol. 2014; 31(9):2376-86.
PMID: 24925926
PMC: 4137713.
DOI: 10.1093/molbev/msu189.
Massive gene transfer and extensive RNA editing of a symbiotic dinoflagellate plastid genome.
Mungpakdee S, Shinzato C, Takeuchi T, Kawashima T, Koyanagi R, Hisata K
Genome Biol Evol. 2014; 6(6):1408-22.
PMID: 24881086
PMC: 4079212.
DOI: 10.1093/gbe/evu109.
Evolution of chloroplast transcript processing in Plasmodium and its chromerid algal relatives.
Dorrell R, Drew J, Nisbet R, Howe C
PLoS Genet. 2014; 10(1):e1004008.
PMID: 24453981
PMC: 3894158.
DOI: 10.1371/journal.pgen.1004008.
The chloroplast genome of Pellia endiviifolia: gene content, RNA-editing pattern, and the origin of chloroplast editing.
Grosche C, Funk H, Maier U, Zauner S
Genome Biol Evol. 2012; 4(12):1349-57.
PMID: 23221608
PMC: 3542565.
DOI: 10.1093/gbe/evs114.
Functional remodeling of RNA processing in replacement chloroplasts by pathways retained from their predecessors.
Dorrell R, Howe C
Proc Natl Acad Sci U S A. 2012; 109(46):18879-84.
PMID: 23112181
PMC: 3503182.
DOI: 10.1073/pnas.1212270109.