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Evaluation of Developmental Phenotypes Produced by Morpholino Antisense Targeting of a Sea Urchin Runx Gene

Overview
Journal BMC Biol
Publisher Biomed Central
Specialty Biology
Date 2004 May 11
PMID 15132741
Citations 13
Authors
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Abstract

Background: Runx transcription factors are important regulators of metazoan development. The sea urchin Runx gene SpRunt was previously identified as a trans-activator of the CyIIIa actin gene, a differentiation marker of larval aboral ectoderm. Here we extend the functional analysis of SpRunt, using morpholino antisense oligonucleotides (morpholinos) to interfere with SpRunt expression in the embryo.

Results: The developmental effects of four different SpRunt-specific morpholinos were evaluated. The two morpholinos most effective at knocking down SpRunt produce an identical mitotic catastrophe phenotype at late cleavage stage that is an artifact of coincidental mis-targeting to histone mRNA, providing a cautionary example of the insufficiency of two different morpholinos as a control for specificity. The other two morpholinos produce gastrula stage proliferation and differentiation defects that are rescued by exogenous SpRunt mRNA. The expression of 22 genes involved in cell proliferation and differentiation was analyzed in the latter embryos by quantitative polymerase chain reaction. Knockdown of SpRunt was found to perturb the expression of differentiation markers in all of the major tissue territories as well as the expression of cell cycle control genes, including cyclin B and cyclin D.

Conclusions: SpRunt is essential for embryonic development, and is required globally to coordinate cell proliferation and differentiation.

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References
1.
Stricker S, Poustka A, Wiecha U, Stiege A, Hecht J, Panopoulou G . A single amphioxus and sea urchin runt-gene suggests that runt-gene duplications occurred in early chordate evolution. Dev Comp Immunol. 2003; 27(8):673-84. DOI: 10.1016/s0145-305x(03)00037-5. View

2.
Draper B, Morcos P, Kimmel C . Inhibition of zebrafish fgf8 pre-mRNA splicing with morpholino oligos: a quantifiable method for gene knockdown. Genesis. 2001; 30(3):154-6. DOI: 10.1002/gene.1053. View

3.
Cavalieri V, Spinelli G, Di Bernardo M . Impairing Otp homeodomain function in oral ectoderm cells affects skeletogenesis in sea urchin embryos. Dev Biol. 2003; 262(1):107-18. DOI: 10.1016/s0012-1606(03)00317-8. View

4.
Rennert J, Coffman J, Mushegian A, Robertson A . The evolution of Runx genes I. A comparative study of sequences from phylogenetically diverse model organisms. BMC Evol Biol. 2003; 3:4. PMC: 153517. DOI: 10.1186/1471-2148-3-4. View

5.
Hug B, Ahmed N, Robbins J, Lazar M . A chromatin immunoprecipitation screen reveals protein kinase Cbeta as a direct RUNX1 target gene. J Biol Chem. 2003; 279(2):825-30. DOI: 10.1074/jbc.M309524200. View