» Articles » PMID: 15020050

Transcription Through Chromatin: Understanding a Complex FACT

Overview
Specialties Biochemistry
Biophysics
Date 2004 Mar 17
PMID 15020050
Citations 37
Authors
Affiliations
Soon will be listed here.
Abstract

In eukaryotic cells, genomic DNA is assembled with chromosomal proteins, mainly histones, in a highly compact structure termed chromatin. In this form, DNA is not readily accessible to the cellular machineries, which require DNA as a template. Dynamic changes in chromatin organization play a critical role in regulation of DNA-dependent processes such as transcription, DNA replication, recombination and repair. Chromatin structure is altered in transcriptionally active loci: the basic chromatin unit, the nucleosome, appears to be depleted for one histone H2A/H2B dimer. Previously, reconstitution of RNA polymerase II (PolII)-driven transcription on chromatin templates in a highly purified in vitro system led to identification of FACT (for facilitates chromatin transcription), which was required for productive transcript elongation through nucleosomes. FACT was proposed to promote PolII transcription through nucleosomes by removing either one or both H2A/H2B dimers. Here we present an overview of the earlier studies, which resulted in the initial identification and characterization of FACT, as well as the recent findings that refine the model for the mechanism of FACT function in transcription.

Citing Articles

The FAcilitates Chromatin Transcription complex regulates the ratio of glycolysis to oxidative phosphorylation in neural stem cells.

Lou Y, Wu L, Cai W, Deng H, Sang R, Xie S J Mol Cell Biol. 2024; 16(4).

PMID: 38719542 PMC: 11467811. DOI: 10.1093/jmcb/mjae017.


PRO-IP-seq tracks molecular modifications of engaged Pol II complexes at nucleotide resolution.

Vihervaara A, Versluis P, Himanen S, Lis J Nat Commun. 2023; 14(1):7039.

PMID: 37923726 PMC: 10624850. DOI: 10.1038/s41467-023-42715-3.


FACT regulates pluripotency through proximal and distal regulation of gene expression in murine embryonic stem cells.

Klein D, Lardo S, McCannell K, Hainer S BMC Biol. 2023; 21(1):167.

PMID: 37542287 PMC: 10403911. DOI: 10.1186/s12915-023-01669-0.


The ULK3 kinase is a determinant of keratinocyte self-renewal and tumorigenesis targeting the arginine methylome.

Goruppi S, Clocchiatti A, Bottoni G, Di Cicco E, Ma M, Tassone B Nat Commun. 2023; 14(1):887.

PMID: 36797248 PMC: 9935893. DOI: 10.1038/s41467-023-36410-6.


The Biological Significance of Targeting Acetylation-Mediated Gene Regulation for Designing New Mechanistic Tools and Potential Therapeutics.

OGarro C, Igbineweka L, Ali Z, Mezei M, Mujtaba S Biomolecules. 2021; 11(3).

PMID: 33803759 PMC: 8003229. DOI: 10.3390/biom11030455.