» Articles » PMID: 14671325

Direct Observation of Tiers in the Energy Landscape of a Chromoprotein: a Single-molecule Study

Overview
Specialty Science
Date 2003 Dec 13
PMID 14671325
Citations 34
Authors
Affiliations
Soon will be listed here.
Abstract

Single-molecule spectroscopic techniques were applied to individual pigments embedded in a chromoprotein. A sensitive tool to monitor structural fluctuations of the protein backbone in the local environment of the chromophore is provided by recording the changes of the spectral positions of the pigment absorptions as a function of time. The data provide information about the organization of the energy landscape of the protein in tiers that can be characterized by an average barrier height. Additionally, a correlation between the average barrier height within a distinct tier and the time scale of the structural fluctuations is observed.

Citing Articles

High-Resolution Frequency-Domain Spectroscopic and Modeling Studies of Photosystem I (PSI), PSI Mutants and PSI Supercomplexes.

Zazubovich V, Jankowiak R Int J Mol Sci. 2024; 25(7).

PMID: 38612659 PMC: 11011720. DOI: 10.3390/ijms25073850.


Identification of Residues Potentially Involved in Optical Shifts in the Water-Soluble Chlorophyll -Binding Protein through Molecular Dynamics Simulations.

Mai M, Zazubovich V, Mansbach R J Phys Chem B. 2024; 128(6):1371-1384.

PMID: 38299975 PMC: 10876061. DOI: 10.1021/acs.jpcb.3c06889.


Cryogenic Single-Molecule Fluorescence Detection of the Mid-Infrared Response of an Intrinsic Pigment in a Light-Harvesting Complex.

Otomo K, Dewa T, Matsushita M, Fujiyoshi S J Phys Chem B. 2023; 127(22):4959-4965.

PMID: 37222077 PMC: 10258799. DOI: 10.1021/acs.jpcb.3c00284.


Preprocess dependence of optical properties of ensembles and single siphonaxanthin-containing major antenna from the marine green alga Codium fragile.

Brotosudarmo T, Wittmann B, Seki S, Fujii R, Kohler J Sci Rep. 2022; 12(1):8461.

PMID: 35589761 PMC: 9120457. DOI: 10.1038/s41598-022-11572-3.


Microsecond and millisecond dynamics in the photosynthetic protein LHCSR1 observed by single-molecule correlation spectroscopy.

Kondo T, Gordon J, Pinnola A, DallOsto L, Bassi R, Schlau-Cohen G Proc Natl Acad Sci U S A. 2019; 116(23):11247-11252.

PMID: 31101718 PMC: 6561297. DOI: 10.1073/pnas.1821207116.


References
1.
Frauenfelder H, Sligar S, Wolynes P . The energy landscapes and motions of proteins. Science. 1991; 254(5038):1598-603. DOI: 10.1126/science.1749933. View

2.
Hu X, Ritz T, Damjanovic A, Autenrieth F, Schulten K . Photosynthetic apparatus of purple bacteria. Q Rev Biophys. 2002; 35(1):1-62. DOI: 10.1017/s0033583501003754. View

3.
van Oijen AM , Ketelaars , KOHLER , Aartsma , Schmidt . Unraveling the electronic structure of individual photosynthetic pigment-protein complexes . Science. 1999; 285(5426):400-2. DOI: 10.1126/science.285.5426.400. View

4.
Gall A, Fowler G, Hunter C, Robert B . Influence of the protein binding site on the absorption properties of the monomeric bacteriochlorophyll in Rhodobacter sphaeroides LH2 complex. Biochemistry. 1998; 36(51):16282-7. DOI: 10.1021/bi9717237. View

5.
Parak F, Nienhaus G . Myoglobin, a paradigm in the study of protein dynamics. Chemphyschem. 2002; 3(3):249-54. DOI: 10.1002/1439-7641(20020315)3:3<249::AID-CPHC249>3.0.CO;2-A. View