» Articles » PMID: 12409618

Physical and Chemical Considerations of Damage Induced in Protein Crystals by Synchrotron Radiation: a Radiation Chemical Perspective

Overview
Date 2002 Nov 1
PMID 12409618
Citations 38
Authors
Affiliations
Soon will be listed here.
Abstract

Radiation-induced degradation of protein or DNA samples by synchrotron radiation is an inherent problem in X-ray crystallography, especially at the 'brighter' light sources. This short review gives a radiation chemical perspective on some of the physical and chemical processes that need to be considered in understanding potential pathways leading to the gradual degradation of the samples. Under the conditions used for X-ray crystallography at a temperature of <100 K in the presence of cryoprotectant agents, the majority of radiation damage of the protein samples arises from direct ionization of the amino acid residues and their associated water molecules. Some of the chemical processes that may occur at these protein centres, such as bond scission, are discussed. Several approaches are discussed that may reduce radiation damage, using agents known from radiation chemistry to minimize radical-induced degradation of the sample.

Citing Articles

Probing soft X-ray induced photoreduction of a model Mn-complex at cryogenic conditions.

Chatterjee K, Lee S, Kao L, Doyle M, Titus C, Leone S J Synchrotron Radiat. 2025; 32(Pt 2):399-407.

PMID: 39899410 PMC: 11892889. DOI: 10.1107/S1600577524012189.


Doses for X-ray and electron diffraction: New features in RADDOSE-3D including intensity decay models.

Dickerson J, McCubbin P, Brooks-Bartlett J, Garman E Protein Sci. 2024; 33(7):e5005.

PMID: 38923423 PMC: 11196903. DOI: 10.1002/pro.5005.


Identifying and avoiding radiation damage in macromolecular crystallography.

Shelley K, Garman E Acta Crystallogr D Struct Biol. 2024; 80(Pt 5):314-327.

PMID: 38700059 PMC: 11066884. DOI: 10.1107/S2059798324003243.


Assessing the prospect of XAFS experiments of metalloproteins under in vivo conditions at Indus-2 synchrotron facility, India.

Lahiri D, Agrawal R, Chandravanshi K, Rajput P, Agrawal A, Dwivedi A J Synchrotron Radiat. 2023; 30(Pt 2):449-456.

PMID: 36891859 PMC: 10000809. DOI: 10.1107/S1600577522011791.


Trapping X-ray Radiation Damage from Homolytic Se-C Bond Cleavage in BnSeSeBn Crystals (Bn=benzyl, CH C H ).

Schurmann C, Teuteberg T, Stuckl A, Ruth P, Hecker F, Herbst-Irmer R Angew Chem Int Ed Engl. 2022; 61(26):e202203665.

PMID: 35417063 PMC: 9320817. DOI: 10.1002/anie.202203665.