» Articles » PMID: 12032095

Involvement of Human Polynucleotide Kinase in Double-strand Break Repair by Non-homologous End Joining

Overview
Journal EMBO J
Date 2002 May 29
PMID 12032095
Citations 86
Authors
Affiliations
Soon will be listed here.
Abstract

The efficient repair of double-strand breaks (DSBs) in DNA is critical for the maintenance of genome stability. In mammalian cells, repair can occur by homologous recombination or by non-homologous end joining (NHEJ). DNA breaks caused by reactive oxygen or ionizing radiation often contain non- conventional end groups that must be processed to restore the ligatable 3'-OH and 5'-phosphate moieties which are necessary for efficient repair by NHEJ. Here, using cell-free extracts that efficiently catalyse NHEJ in vitro, we show that human polynucleotide kinase (PNK) promotes phosphate replacement at damaged termini, but only within the context of the NHEJ apparatus. Phosphorylation of terminal 5'-OH groups by PNK was blocked by depletion of the NHEJ factor XRCC4, or by an inactivating mutation in DNA-PK(cs), indicating that the DNA kinase activity in the extract is coupled with active NHEJ processes. Moreover, we find that end-joining activity can be restored to PNK-depleted extracts by addition of human PNK, but not bacteriophage T4 PNK. This work provides the first demonstration of a direct, specific role for human PNK in DSB repair.

Citing Articles

SNM1A is crucial for efficient repair of complex DNA breaks in human cells.

Swift L, Lagerholm B, Henderson L, Ratnaweera M, Baddock H, Sengerova B Nat Commun. 2024; 15(1):5392.

PMID: 38918391 PMC: 11199599. DOI: 10.1038/s41467-024-49583-5.


An electrochemical biosensor for T4 polynucleotide kinase activity identification according to host-guest recognition among phosphate pillar[5]arene@palladium nanoparticles@reduced graphene oxide nanocomposite and toluidine blue.

Wu Y, Yi J, Su A, Zhang Y, Wang H, Yang L Mikrochim Acta. 2023; 190(10):394.

PMID: 37715009 DOI: 10.1007/s00604-023-05983-w.


Structure and mechanism in non-homologous end joining.

Vogt A, He Y DNA Repair (Amst). 2023; 130:103547.

PMID: 37556875 PMC: 10528545. DOI: 10.1016/j.dnarep.2023.103547.


Networks and Islands of Genome Nano-architecture and Their Potential Relevance for Radiation Biology : (A Hypothesis and Experimental Verification Hints).

Hausmann M, Hildenbrand G, Pilarczyk G Results Probl Cell Differ. 2022; 70:3-34.

PMID: 36348103 DOI: 10.1007/978-3-031-06573-6_1.


A label-free T4 polynucleotide kinase fluorescence sensor based on split dimeric G-quadruplex and ligation-induced dimeric G-quadruplex/thioflavin T conformation.

Wei L, Kong X, Wang M, Zhang Y, Pan R, Cheng Y Anal Bioanal Chem. 2022; 414(27):7923-7933.

PMID: 36136111 DOI: 10.1007/s00216-022-04327-6.


References
1.
Pouliot J, Yao K, Robertson C, NASH H . Yeast gene for a Tyr-DNA phosphodiesterase that repairs topoisomerase I complexes. Science. 1999; 286(5439):552-5. DOI: 10.1126/science.286.5439.552. View

2.
Karimi-Busheri F, Daly G, Robins P, Canas B, Pappin D, Sgouros J . Molecular characterization of a human DNA kinase. J Biol Chem. 1999; 274(34):24187-94. DOI: 10.1074/jbc.274.34.24187. View

3.
Thompson L, WEST M . XRCC1 keeps DNA from getting stranded. Mutat Res. 2000; 459(1):1-18. DOI: 10.1016/s0921-8777(99)00058-0. View

4.
Nick McElhinny S, Snowden C, McCarville J, Ramsden D . Ku recruits the XRCC4-ligase IV complex to DNA ends. Mol Cell Biol. 2000; 20(9):2996-3003. PMC: 85565. DOI: 10.1128/MCB.20.9.2996-3003.2000. View

5.
Chen L, Trujillo K, Sung P, Tomkinson A . Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase. J Biol Chem. 2000; 275(34):26196-205. DOI: 10.1074/jbc.M000491200. View