The Design, Synthesis, and Evaluation of Molecules That Enable or Enhance Cellular Uptake: Peptoid Molecular Transporters
Overview
Affiliations
Certain proteins contain subunits that enable their active translocation across the plasma membrane into cells. In the specific case of HIV-1, this subunit is the basic domain Tat(49-57) (RKKRRQRRR). To establish the optimal structural requirements for this translocation process, and thereby to develop improved molecular transporters that could deliver agents into cells, a series of analogues of Tat(49-57) were prepared and their cellular uptake into Jurkat cells was determined by flow cytometry. All truncated and alanine-substituted analogues exhibited diminished cellular uptake, suggesting that the cationic residues of Tat(49-57) play a principal role in its uptake. Charge alone, however, is insufficient for transport as oligomers of several cationic amino acids (histidine, lysine, and ornithine) are less effective than Tat(49-57) in cellular uptake. In contrast, a 9-mer of l-arginine (R9) was 20-fold more efficient than Tat(49-57) at cellular uptake as determined by Michaelis-Menton kinetic analysis. The d-arginine oligomer (r9) exhibited an even greater uptake rate enhancement (>100-fold). Collectively, these studies suggest that the guanidinium groups of Tat(49-57) play a greater role in facilitating cellular uptake than either charge or backbone structure. Based on this analysis, we designed and synthesized a class of polyguanidine peptoid derivatives. Remarkably, the subset of peptoid analogues containing a six-methylene spacer between the guanidine head group and backbone (N-hxg), exhibited significantly enhanced cellular uptake compared to Tat(49-57) and even to r9. Overall, a transporter has been developed that is superior to Tat(49-57), protease resistant, and more readily and economically prepared.
Egress-enhancing mutation reveals inefficiency of non-enveloped virus cell exit.
Rodriguez-Irizarry V, Maples R, Pfeiffer J bioRxiv. 2025; .
PMID: 40060481 PMC: 11888378. DOI: 10.1101/2025.02.25.640062.
ADSL-generated fumarate binds and inhibits STING to promote tumour immune evasion.
Duan Y, Hu Z, Han P, Lei B, Wang S, Wang Z Nat Cell Biol. 2025; .
PMID: 40033100 DOI: 10.1038/s41556-025-01627-8.
Lim G, Jo B Int J Mol Sci. 2025; 26(3).
PMID: 39941072 PMC: 11818168. DOI: 10.3390/ijms26031304.
Tang X, Wang H, Yin Y, Zhong G Gene Ther. 2025; .
PMID: 39939797 DOI: 10.1038/s41434-025-00519-8.
Qian X, Zhou Q, Ouyang Y, Wu X, Sun X, Wang S Proc Natl Acad Sci U S A. 2025; 122(5):e2412473122.
PMID: 39888917 PMC: 11804496. DOI: 10.1073/pnas.2412473122.