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Zijing Xie

Explore the profile of Zijing Xie including associated specialties, affiliations and a list of published articles. Areas
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Articles 27
Citations 241
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Recent Articles
1.
Chen M, Luo X, Xu S, Li L, Li J, Xie Z, et al.
Imeta . 2025 Mar; 4(1):e269. PMID: 40027482
In metabarcoding research, such as taxon identification, phylogenetic placement plays a critical role. However, many existing phylogenetic placement methods lack comprehensive features for downstream analysis and visualization. Visualization tools often...
2.
Zhou X, Li H, Xie Z
Arch Dermatol Res . 2025 Feb; 317(1):418. PMID: 39954139
Skin scalded injury is a devastating condition. Exosomes derived from adipose-derived mesenchymal stem cells (ASC-exos) have been shown encouraging therapeutic potential in wound healing. Here, we explored the activity and...
3.
Wu S, Tian L, Guo S, Lei H, Zhao X, Hao X, et al.
Plant Biotechnol J . 2025 Feb; PMID: 39950420
Leaf morphogenesis is a crucial process in plants that governs essential physiological functions such as photosynthesis and transpiration. Despite significant advances in understanding leaf development, the mechanism of intricate cellular...
4.
Li L, Xie W, Zhan L, Wen S, Luo X, Xu S, et al.
J Natl Cancer Cent . 2024 Sep; 4(2):97-106. PMID: 39282584
The evolutionary dynamics of cancer, characterized by its profound heterogeneity, demand sophisticated tools for a holistic understanding. This review delves into tumor phylogenetics, an essential approach bridging evolutionary biology with...
5.
You Z, Hu Z, Hou C, Ma C, Xu X, Zheng Y, et al.
Neoplasia . 2024 Sep; 57:101050. PMID: 39243502
Glioblastoma multiforme (GBM) is the most aggressive brain tumor with poor prognosis. A better understanding of mechanisms concerned in glioma invasion might be critical for treatment optimization. Given that epithelial-mesenchymal...
6.
Wang D, Chen G, Li L, Wen S, Xie Z, Luo X, et al.
Chin Med J (Engl) . 2024 Jul; 137(16):1950-1956. PMID: 39039634
Interpreting genes of interest is essential for identifying molecular mechanisms, but acquiring such information typically involves tedious manual retrieval. To streamline this process, the fanyi package offers tools to retrieve...
7.
Xu S, Hu E, Cai Y, Xie Z, Luo X, Zhan L, et al.
Nat Protoc . 2024 Jul; 19(11):3292-3320. PMID: 39019974
With the advent of multiomics, software capable of multidimensional enrichment analysis has become increasingly crucial for uncovering gene set variations in biological processes and disease pathways. This is essential for...
8.
Hu W, Wang R, Hao X, Li S, Zhao X, Xie Z, et al.
Plant J . 2024 May; 119(2):705-719. PMID: 38703081
A fundamental question in developmental biology is how to regulate grain size to improve crop yields. Despite this, little is still known about the genetics and molecular mechanisms regulating grain...
9.
Qin H, Yang S, Feng Z, Wu S, Cai T, Xie Z, et al.
Environ Toxicol . 2024 Apr; 39(10):4547-4561. PMID: 38578024
The clinical outcomes of osteosarcoma are relatively dismal. As immunotherapy has revolutionized treatment for solid tumors, exploring novel immunotherapy-related therapeutic targets for osteosarcoma is important. In this study, we aimed...
10.
Zhan L, Luo X, Xie W, Zhu X, Xie Z, Lin J, et al.
J Genet Genomics . 2024 Feb; 51(7):762-768. PMID: 38417547
The molecular clock model is fundamental for inferring species divergence times from molecular sequences. However, its direct application may introduce significant biases due to sequencing errors, recombination events, and inaccurately...