Valmik Desai
Overview
Explore the profile of Valmik Desai including associated specialties, affiliations and a list of published articles.
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Articles
12
Citations
253
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Recent Articles
1.
AbdulHameed M, Dey S, Xu Z, Clancy B, Desai V, Wallqvist A
Front Pharmacol
. 2025 Mar;
16:1498945.
PMID: 40078284
Transporters are membrane proteins that are critical for normal cellular function and mediate the transport of endogenous and exogenous chemicals. Chemical interactions with these transporters have the potential to affect...
2.
Schyman P, Xu Z, Desai V, Wallqvist A
Front Pharmacol
. 2021 Feb;
12:601511.
PMID: 33633572
Gene-set analysis is commonly used to identify trends in gene expression when cells, tissues, organs, or organisms are subjected to conditions that differ from those within the normal physiological range....
3.
Schyman P, Liu R, Desai V, Wallqvist A
Front Pharmacol
. 2017 Dec;
8:889.
PMID: 29255418
In drug development, early assessments of pharmacokinetic and toxic properties are important stepping stones to avoid costly and unnecessary failures. Considerable progress has recently been made in the development of...
4.
Hang J, Zavaljevski N, Yang Y, Desai V, Ruck R, Macareo L, et al.
PLoS One
. 2017 Dec;
12(12):e0188461.
PMID: 29216202
Certain occupational and geographical exposures have been associated with an increased risk of lung disease. As a baseline for future studies, we sought to characterize the upper respiratory microbiomes of...
5.
Chaudhury S, Gromowski G, Ripoll D, Khavrutskii I, Desai V, Wallqvist A
PLoS Negl Trop Dis
. 2017 Feb;
11(2):e0005395.
PMID: 28222130
Background: A majority infections caused by dengue virus (DENV) are asymptomatic, but a higher incidence of severe illness, such as dengue hemorrhagic fever, is associated with secondary infections, suggesting that...
6.
Hang J, Desai V, Zavaljevski N, Yang Y, Lin X, Vijaya Satya R, et al.
Microbiome
. 2014 Sep;
2:31.
PMID: 25228989
Background: Sample storage conditions, extraction methods, PCR primers, and parameters are major factors that affect metagenomics analysis based on microbial 16S rRNA gene sequencing. Most published studies were limited to...
7.
Yu C, Desai V, Cheng L, Reifman J
BMC Bioinformatics
. 2012 Jun;
13:143.
PMID: 22726705
Background: The concept of orthology is key to decoding evolutionary relationships among genes across different species using comparative genomics. QuartetS is a recently reported algorithm for large-scale orthology detection. Based...
8.
Yu C, Zavaljevski N, Desai V, Reifman J
Nucleic Acids Res
. 2011 May;
39(13):e88.
PMID: 21572104
The unparalleled growth in the availability of genomic data offers both a challenge to develop orthology detection methods that are simultaneously accurate and high throughput and an opportunity to improve...
9.
Kumar K, Desai V, Cheng L, Khitrov M, Grover D, Vijaya Satya R, et al.
PLoS One
. 2011 Mar;
6(3):e17469.
PMID: 21408217
Background: The annotation of genomes from next-generation sequencing platforms needs to be rapid, high-throughput, and fully integrated and automated. Although a few Web-based annotation services have recently become available, they...
10.
Lee M, Bondugula R, Desai V, Zavaljevski N, Yeh I, Wallqvist A, et al.
PLoS One
. 2009 Jul;
4(7):e6254.
PMID: 19606223
Background: Protein structures are critical for understanding the mechanisms of biological systems and, subsequently, for drug and vaccine design. Unfortunately, protein sequence data exceed structural data by a factor of...