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Tomas F Pena

Explore the profile of Tomas F Pena including associated specialties, affiliations and a list of published articles. Areas
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Articles 5
Citations 91
Followers 0
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Recent Articles
1.
Abuin J, Lopes N, Ferreira L, Pena T, Schmidt B
PLoS One . 2020 Oct; 15(10):e0239741. PMID: 33022000
The progress of next-generation sequencing has lead to the availability of massive data sets used by a wide range of applications in biology and medicine. This has sparked significant interest...
2.
Kobus R, Abuin J, Muller A, Hellmann S, Pichel J, Pena T, et al.
BMC Bioinformatics . 2020 Mar; 21(1):102. PMID: 32164527
Background: All-Food-Sequencing (AFS) is an untargeted metagenomic sequencing method that allows for the detection and quantification of food ingredients including animals, plants, and microbiota. While this approach avoids some of...
3.
Abuin J, Pena T, Pichel J
Bioinformatics . 2017 Jun; 33(18):2948-2950. PMID: 28582480
Motivation: One basic step in many bioinformatics analyses is the multiple sequence alignment. One of the state-of-the-art tools to perform multiple sequence alignment is PASTA (Practical Alignments using SATé and...
4.
Abuin J, Pichel J, Pena T, Amigo J
PLoS One . 2016 May; 11(5):e0155461. PMID: 27182962
Next-generation sequencing (NGS) technologies have led to a huge amount of genomic data that need to be analyzed and interpreted. This fact has a huge impact on the DNA sequence...
5.
Abuin J, Pichel J, Pena T, Amigo J
Bioinformatics . 2015 Sep; 31(24):4003-5. PMID: 26323715
Unlabelled: BigBWA is a new tool that uses the Big Data technology Hadoop to boost the performance of the Burrows-Wheeler aligner (BWA). Important reductions in the execution times were observed...