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Tom Sante

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Articles 18
Citations 447
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Recent Articles
1.
Verwilt J, Hellemans J, Sante T, Mestdagh P, Vandesompele J
Sci Rep . 2022 Apr; 12(1):6603. PMID: 35459775
To increase the throughput, lower the cost, and save scarce test reagents, laboratories can pool patient samples before SARS-CoV-2 RT-qPCR testing. While different sample pooling methods have been proposed and...
2.
Van der Linden M, Raman L, Vander Trappen A, Dheedene A, De Smet M, Sante T, et al.
Arch Pathol Lab Med . 2019 Dec; PMID: 31846367
Context.—: In routine clinical practice, tumor tissue is stored in formalin-fixed, paraffin-embedded blocks. However, the use of formalin-fixed, paraffin-embedded tissue for genome analysis is challenged by poorer DNA quality and...
3.
Hemelsoet D, Vanlander A, Smet J, Vantroys E, Acou M, Goethals I, et al.
Neurol Genet . 2018 Dec; 4(6):e298. PMID: 30569017
Objective: To report the clinical, radiologic, biochemical, and molecular characteristics in a 46-year-old participant with adult-onset Leigh syndrome (LS), followed by parkinsonism. Methods: Case description with diagnostic workup included blood...
4.
De Wilde B, Beckers A, Lindner S, Kristina A, De Preter K, Depuydt P, et al.
Oncotarget . 2018 Mar; 9(9):8334-8349. PMID: 29492199
Genetically engineered mouse models have proven to be essential tools for unraveling fundamental aspects of cancer biology and for testing novel therapeutic strategies. To optimally serve these goals, it is...
5.
Van Roy N, Van der Linden M, Menten B, Dheedene A, Vandeputte C, Van Dorpe J, et al.
Clin Cancer Res . 2017 Jul; 23(20):6305-6314. PMID: 28710315
Neuroblastoma (NB) is a heterogeneous disease characterized by distinct clinical features and by the presence of typical copy-number alterations (CNAs). Given the strong association of these CNA profiles with prognosis,...
6.
Van Cauwenbergh C, Van Schil K, Cannoodt R, Bauwens M, Van Laethem T, De Jaegere S, et al.
Genet Med . 2016 Sep; 19(4):457-466. PMID: 27608171
Purpose: Our goal was to design a customized microarray, arrEYE, for high-resolution copy number variant (CNV) analysis of known and candidate genes for inherited retinal dystrophy (iRD) and retina-expressed noncoding...
7.
Dheedene A, Sante T, De Smet M, Vanbellinghen J, Grisart B, Vergult S, et al.
Prenat Diagn . 2016 May; 36(8):699-707. PMID: 27176606
Objectives: To implement non-invasive prenatal testing (NIPT) for fetal aneuploidies with semiconductor sequencing in an academic cytogenomic laboratory and to evaluate the first 15-month experience on clinical samples. Methods: We...
8.
Deleye L, Dheedene A, De Coninck D, Sante T, Christodoulou C, Heindryckx B, et al.
Fertil Steril . 2015 Aug; 104(5):1276-85.e1. PMID: 26282994
Objective: To add evidence that massive parallel sequencing (MPS) is a valuable substitute for array comparative genomic hybridization (arrayCGH) with a resolution that is more appropriate for preimplantation genetic diagnosis...
9.
Deleye L, De Coninck D, Christodoulou C, Sante T, Dheedene A, Heindryckx B, et al.
Sci Rep . 2015 Jul; 5:11711. PMID: 26122179
Current whole genome amplification (WGA) methods lead to amplification bias resulting in over- and under-represented regions in the genome. Nevertheless, certain WGA methods, such as SurePlex and subsequent arrayCGH analysis,...
10.
Sante T, Vergult S, Volders P, Kloosterman W, Trooskens G, De Preter K, et al.
PLoS One . 2014 Dec; 9(12):e113800. PMID: 25503062
Structural genomic variations play an important role in human disease and phenotypic diversity. With the rise of high-throughput sequencing tools, mate-pair/paired-end/single-read sequencing has become an important technique for the detection...