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» Authors » Tamara V Tsoi

Tamara V Tsoi

Explore the profile of Tamara V Tsoi including associated specialties, affiliations and a list of published articles. Areas
Snapshot
Articles 6
Citations 234
Followers 0
Related Specialties
Microbiology
Environmental Health
Science
Top 10 Co-Authors
James M Tiedje
Jorge L M Rodrigues
Syed A Hashsham
Joonhong Park
Michael R Aiello
Vincent J Denef
Woo Jun Sul
Eshwar Mahenthiralingam
Alban Ramette
James R Cole
Published In
Appl Environ Microbiol
J Microbiol Methods
Proc Natl Acad Sci U S A
Environ Microbiol
PLoS One
Affiliations
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Recent Articles
1.
Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay
Chai B, Tsoi T, Iwai S, Liu C, Fish J, Gu C, et al.
PLoS One . 2016 Jun; 11(6):e0157008. PMID: 27309357
Sphingomonas wittichii strain RW1 (RW1) is one of the few strains that can grow on dibenzo-p-dioxin (DD). We conducted a transcriptomic study of RW1 using RNA-Seq to outline transcriptional responses...
2.
DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment
Sul W, Park J, Quensen 3rd J, Rodrigues J, Seliger L, Tsoi T, et al.
Appl Environ Microbiol . 2009 Aug; 75(17):5501-6. PMID: 19648381
Stable isotope probing with [(13)C]biphenyl was used to explore the genetic properties of indigenous bacteria able to grow on biphenyl in PCB-contaminated River Raisin sediment. A bacterial 16S rRNA gene...
3.
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility
Chain P, Denef V, Konstantinidis K, Vergez L, Agullo L, Reyes V, et al.
Proc Natl Acad Sci U S A . 2006 Oct; 103(42):15280-7. PMID: 17030797
Burkholderia xenovorans LB400 (LB400), a well studied, effective polychlorinated biphenyl-degrader, has one of the two largest known bacterial genomes and is the first nonpathogenic Burkholderia isolate sequenced. From an evolutionary...
4.
Degradation of aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. strain RHA1(fcb)
Rodrigues J, Kachel C, Aiello M, Quensen J, Maltseva O, Tsoi T, et al.
Appl Environ Microbiol . 2006 Apr; 72(4):2476-82. PMID: 16597946
Burkholderia xenovorans strain LB400, which possesses the biphenyl pathway, was engineered to contain the oxygenolytic ortho dehalogenation (ohb) operon, allowing it to grow on 2-chlorobenzoate and to completely mineralize 2-chlorobiphenyl....
5.
Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities
Denef V, Park J, Rodrigues J, Tsoi T, Hashsham S, Tiedje J
Environ Microbiol . 2003 Sep; 5(10):933-43. PMID: 14510847
Spotted oligonucleotide microarrays potentially offer a wide scope of applications for microbial ecology, especially as they improve the flexibility of design and the specificity of detection compared to PCR product...
6.
Use of both 16S rRNA and engineered functional genes with real-time PCR to quantify an engineered, PCB-degrading Rhodococcus in soil
Rodrigues J, Aiello M, Urbance J, Tsoi T, Tiedje J
J Microbiol Methods . 2002 Jul; 51(2):181-9. PMID: 12133610
A real-time PCR (RTm-PCR) assay using fluorescently labeled oligonucleotides (TaqMan probes) was used to detect and quantify the recombinant Rhodococcus sp. strain RHA1(fcb) in soil. One primer and probe set...