T A Soares
Overview
Explore the profile of T A Soares including associated specialties, affiliations and a list of published articles.
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Articles
14
Citations
234
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0
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Recent Articles
1.
Padilha J, Almeida A, Souza-Kasprzyk J, Silva M, Cunha L, Soares T, et al.
Environ Pollut
. 2025 Jan;
367:125607.
PMID: 39755353
This study investigates essential (Mg, Ca, Fe, Mn, Cu, Zn, Se, Ni) and non-essential (Li, Be, Cr, Rb, Sr, Cs, Cd, Sn, Ba, and Pb) element concentrations and stable isotope...
2.
Apra E, Bylaska E, de Jong W, Govind N, Kowalski K, Straatsma T, et al.
J Chem Phys
. 2020 May;
152(18):184102.
PMID: 32414274
Specialized computational chemistry packages have permanently reshaped the landscape of chemical and materials science by providing tools to support and guide experimental efforts and for the prediction of atomistic and...
3.
Silva L, Da Hora G, Soares T, Bojer M, Ingmer H, Macedo A, et al.
Sci Rep
. 2017 Jun;
7(1):2823.
PMID: 28588273
Staphylococcus aureus is an opportunistic pathogen related to a variety of life-threatening infections but for which antimicrobial resistance is liming the treatment options. We report here that myricetin, but not...
4.
Da Hora G, Archilha N, Lopes J, Muller D, Coutinho K, Itri R, et al.
Soft Matter
. 2016 Oct;
12(43):8884-8898.
PMID: 27722742
Antimicrobial peptides (AMPs) are cationic peptides that kill bacteria with a broad spectrum of action, low toxicity to mammalian cells and exceptionally low rates of bacterial resistance. These features have...
5.
Lorenzon E, Riske K, Troiano G, Da Hora G, Soares T, Cilli E
Biochim Biophys Acta
. 2016 Feb;
1858(6):1129-38.
PMID: 26874207
The mechanism of action of antimicrobial peptides depends on physicochemical properties such as structure, concentration, and oligomerization. Here, we focused on the effect of dimerization on the mechanism of action...
6.
Straatsma T, Soares T
Proteins
. 2008 Jul;
74(2):475-88.
PMID: 18655068
The N-terminal domain of outer membrane protein OprF of Pseudomonas aeruginosa forms a membrane spanning eight-stranded antiparallel beta-barrel domain that folds into a membrane channel with low conductance. The structure...
7.
Soares T, Daura X, Oostenbrink C, Smith L, van Gunsteren W
J Biomol NMR
. 2005 Jan;
30(4):407-22.
PMID: 15630561
The quality of molecular dynamics (MD) simulations of proteins depends critically on the biomolecular force field that is used. Such force fields are defined by force-field parameter sets, which are...
8.
Soares T, Lins R, Straatsma T, Briggs J
Biopolymers
. 2002 Oct;
65(4):313-23.
PMID: 12382291
The macrophage migration inhibitory factor (MIF) is a cytokine that shares a common structural architecture and catalytic strategy with three isomerases: 4-oxalocrotonate tautomerase, 5-carboxymethyl-2-hydroxymuconate isomerase, and D-dopachrome tautomerase. A highly...
9.
Soares T, Miller J, Straatsma T
Proteins
. 2001 Dec;
45(4):297-312.
PMID: 11746677
The hydrolysis of GTP in p21(ras) triggers conformational changes that regulate the ras/ERK signaling pathway. An important active site residue is Gln61, which has been found to be mutated in...
10.
Lins R, Adesokan A, Soares T, Briggs J
Pharmacol Ther
. 2000 Mar;
85(3):123-31.
PMID: 10739867
The complete three-dimensional structure of the active site region of the human immunodeficiency virus type 1 (HIV-1) integrase (IN) is not unambiguously known. This region includes a flexible loop comprising...