Stephen Knobloch
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Explore the profile of Stephen Knobloch including associated specialties, affiliations and a list of published articles.
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Articles
18
Citations
100
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Recent Articles
1.
Knobloch S, Salimi F, Buaya A, Ploch S, Thines M
PeerJ
. 2024 Sep;
12:e17893.
PMID: 39346055
Nanopore sequencing technology has enabled the rapid, on-site taxonomic identification of samples from anything and anywhere. However, sequencing errors, inadequate databases, as well as the need for bioinformatic expertise and...
2.
Carlino N, Blanco-Miguez A, Puncochar M, Mengoni C, Pinto F, Tatti A, et al.
Cell
. 2024 Aug;
187(20):5775-5795.e15.
PMID: 39214080
Complex microbiomes are part of the food we eat and influence our own microbiome, but their diversity remains largely unexplored. Here, we generated the open access curatedFoodMetagenomicData (cFMD) resource by...
3.
Corral-Jara K, Skirnisdottir S, Knobloch S, Briem H, Cobo-Diaz J, Carlino N, et al.
Heliyon
. 2024 Jul;
10(13):e33866.
PMID: 39071556
A study was conducted in fish processing facilities to investigate the microbial composition, microbial metabolic potential, and distribution of antibiotic resistance genes. Whole metagenomic sequencing was used to analyze microbial...
4.
Knobloch S, Skirnisdottir S, Dubois M, Mayolle L, Kolypczuk L, Leroi F, et al.
FEMS Microbes
. 2024 May;
5:xtae011.
PMID: 38745980
The gut microbiome plays an important role in maintaining health and productivity of farmed fish. However, the functional role of most gut microorganisms remains unknown. Identifying the stable members of...
5.
Jayasinghe H, Chang H, Knobloch S, Yang S, Hendalage D, Ariyawansa K, et al.
Front Plant Sci
. 2024 Mar;
15:1352997.
PMID: 38495366
Plants are associated with a large diversity of microbes, and these complex plant-associated microbial communities are critical for plant health. Welsh onion ( L.) is one of the key and...
6.
Barcenilla C, Cobo-Diaz J, De Filippis F, Valentino V, Rubio R, ONeil D, et al.
Nat Protoc
. 2024 Jan;
19(5):1291-1310.
PMID: 38267717
Deep investigation of the microbiome of food-production and food-processing environments through whole-metagenome sequencing (WMS) can provide detailed information on the taxonomic composition and functional potential of the microbial communities that...
7.
Leeper A, Sauphar C, Berlizot B, Laduree G, Koppe W, Knobloch S, et al.
Animals (Basel)
. 2023 Aug;
13(16).
PMID: 37627382
Atlantic salmon () is one of the worlds most domesticated fish. As production volumes increase, access to high quality and sustainable protein sources for formulated feeds of this carnivorous fish...
8.
Knobloch S, Skirnisdottir S, Dubois M, Kolypczuk L, Leroi F, Leeper A, et al.
Front Microbiol
. 2022 Aug;
13:912473.
PMID: 35928148
Beneficial bacteria promise to promote the health and productivity of farmed fish species. However, the impact on host physiology is largely strain-dependent, and studies on Arctic char (), a commercially...
9.
Leeper A, Ekmay R, Knobloch S, Skirnisdottir S, Varunjikar M, Dubois M, et al.
Sci Rep
. 2022 Jan;
12(1):567.
PMID: 35022439
Atlantic salmon aquaculture is expanding, and with it, the need to find suitable replacements for conventional protein sources used in formulated feeds. Torula yeast (Cyberlindnera jadinii), has been identified as...
10.
Bergsten P, Vannier P, Klonowski A, Knobloch S, Gudmundsson M, Jackson M, et al.
Front Microbiol
. 2021 Oct;
12:728977.
PMID: 34659155
The island of Surtsey was formed in 1963-1967 on the offshore Icelandic volcanic rift zone. It offers a unique opportunity to study the subsurface biosphere in newly formed oceanic crust...