Srikanth S Manda
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Explore the profile of Srikanth S Manda including associated specialties, affiliations and a list of published articles.
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19
Citations
1629
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Recent Articles
1.
Sambath J, Noronha V, Manda S, Mishra R, Chandrani P, Patil V, et al.
Gene
. 2023 Nov;
893:147952.
PMID: 37918550
Objectives: The aim of this pilot study is to identify the genetic factors that contribute to the response of metronomic chemotherapy in head and neck squamous cell carcinoma (HNSCC) patients...
2.
Goncalves E, Poulos R, Cai Z, Barthorpe S, Manda S, Lucas N, et al.
Cancer Cell
. 2022 Jul;
40(8):835-849.e8.
PMID: 35839778
The proteome provides unique insights into disease biology beyond the genome and transcriptome. A lack of large proteomic datasets has restricted the identification of new cancer biomarkers. Here, proteomes of...
3.
Manda S, Noor Z, Hains P, Zhong Q
Curr Protoc
. 2021 Mar;
1(3):e69.
PMID: 33656278
Data-independent-acquisition mass spectrometry (DIA-MS) is a state-of-the-art proteomic technique for high-throughput identification and quantification of peptides and proteins. Interpretation of DIA-MS data relies on the use of a spectral library,...
4.
Poulos R, Hains P, Shah R, Lucas N, Xavier D, Manda S, et al.
Nat Commun
. 2020 Aug;
11(1):3793.
PMID: 32732981
Reproducible research is the bedrock of experimental science. To enable the deployment of large-scale proteomics, we assess the reproducibility of mass spectrometry (MS) over time and across instruments and develop...
5.
Logan J, Pearson M, Manda S, Choi Y, Field M, Eichenberger R, et al.
PLoS Negl Trop Dis
. 2020 May;
14(5):e0008237.
PMID: 32453752
The human hookworm Necator americanus infects more than 400 million people worldwide, contributing substantially to the poverty in these regions. Adult stage N. americanus live in the small intestine of...
6.
Keshava Prasad T, Mohanty A, Kumar M, Sreenivasamurthy S, Dey G, Nirujogi R, et al.
Genome Res
. 2016 Dec;
27(1):133-144.
PMID: 28003436
Complementing genome sequence with deep transcriptome and proteome data could enable more accurate assembly and annotation of newly sequenced genomes. Here, we provide a proof-of-concept of an integrated approach for...
7.
Li R, Liao G, Nirujogi R, Pinto S, Shaw P, Huang T, et al.
PLoS Pathog
. 2015 Dec;
11(12):e1005346.
PMID: 26714015
Epstein-Barr virus (EBV) is etiologically linked to infectious mononucleosis and several human cancers. EBV encodes a conserved protein kinase BGLF4 that plays a key role in the viral life cycle....
8.
Mitchell C, Getnet D, Kim M, Manda S, Kumar P, Huang T, et al.
BMC Syst Biol
. 2015 Nov;
9:75.
PMID: 26542228
Background: Cellular function and diversity are orchestrated by complex interactions of fundamental biomolecules including DNA, RNA and proteins. Technological advances in genomics, epigenomics, transcriptomics and proteomics have enabled massively parallel...
9.
Beachley V, Wolf M, Sadtler K, Manda S, Jacobs H, Blatchley M, et al.
Nat Methods
. 2015 Oct;
12(12):1197-204.
PMID: 26480475
Cell and protein arrays have demonstrated remarkable utility in the high-throughput evaluation of biological responses; however, they lack the complexity of native tissue and organs. Here we spotted tissue extracellular...
10.
Wu X, Zahari M, Renuse S, Nirujogi R, Kim M, Manda S, et al.
Mol Cell Proteomics
. 2015 Sep;
14(11):2887-900.
PMID: 26330541
Tamoxifen, an estrogen receptor-α (ER) antagonist, is an important agent for the treatment of breast cancer. However, this therapy is complicated by the fact that a substantial number of patients...