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Scott V Edwards

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Articles 182
Citations 7278
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Recent Articles
1.
Edwards S, Fang B, Khost D, Kolyfetis G, Cheek R, Deraad D, et al.
bioRxiv . 2025 Feb; PMID: 39990470
Structural variants (SVs) are widespread in vertebrate genomes, yet their evolutionary dynamics remain poorly understood. Using 45 long-read de novo genome assemblies and pangenome tools, we analyze SVs within three...
2.
Shakya S, Edwards S, Sackton T
BMC Biol . 2025 Feb; 23(1):52. PMID: 39984930
Background: Convergent evolution is the independent evolution of similar traits in unrelated lineages across the Tree of Life. Various genomic signatures can help identify cases of convergent evolution at the...
3.
Mejia N, Termignoni-Garcia F, Learned J, Penniman J, Edwards S
PeerJ . 2024 Dec; 12:e18566. PMID: 39619179
Plastic pollution is a global threat and occurs in almost every marine ecosystem. The amount of plastic in the ocean has increased substantially over the past decade, posing a mounting...
4.
Khodaei M, Edwards S, Beerli P
bioRxiv . 2024 Nov; PMID: 39605625
Methods for rapidly inferring the evolutionary history of species or populations with genome-wide data are progressing, but computational constraints still limit our abilities in this area. We developed an alignment-free...
5.
Fang B, Edwards S
Proc Natl Acad Sci U S A . 2024 Nov; 121(47):e2409943121. PMID: 39531493
Genomic structural variants (SVs) play a crucial role in adaptive evolution, yet their average fitness effects and characterization with pangenome tools are understudied in wild animal populations. We constructed a...
6.
Kryukov A, Kryukov K, Collier K, Fang B, Edwards S
Curr Zool . 2024 Oct; 70(5):618-630. PMID: 39463698
Partial separation of a peripheral population may lead to its divergence and, potentially, speciation due to genetic drift followed by selection and geographic isolation. This process may cause taxonomic uncertainty...
7.
Wu S, Rheindt F, Zhang J, Wang J, Zhang L, Quan C, et al.
Proc Natl Acad Sci U S A . 2024 Sep; 121(39):e2412448121. PMID: 39284071
No abstract available.
8.
Wu S, Rheindt F, Zhang J, Wang J, Zhang L, Quan C, et al.
Proc Natl Acad Sci U S A . 2024 Jul; 121(29):e2409344121. PMID: 38976742
No abstract available.
9.
Butler J, McKinney J, Ludington S, Mabogunje M, Baker P, Singh D, et al.
Dev Biol . 2024 Jun; 514:66-77. PMID: 38851558
The ways in which animals sense the world changes throughout development. For example, young of many species have limited visual capabilities, but still make social decisions, likely based on information...
10.
Thomas G, Gemmell P, Shakya S, Hu Z, Liu J, Sackton T, et al.
Integr Comp Biol . 2024 May; 64(5):1513-1525. PMID: 38816211
Comparative genomics provides ample ways to study genome evolution and its relationship to phenotypic traits. By developing and testing alternate models of evolution throughout a phylogeny, one can estimate rates...