Sai Reddy Achakkagari
Overview
Explore the profile of Sai Reddy Achakkagari including associated specialties, affiliations and a list of published articles.
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10
Citations
128
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Recent Articles
1.
Bozan I, Achakkagari S, Anglin N, Ellis D, Tai H, Stromvik M
Proc Natl Acad Sci U S A
. 2023 Jul;
120(31):e2211117120.
PMID: 37487084
Potato (., family Solanaceae) is the most important noncereal food crop globally. It has over 100 wild relatives in the section , which features species with both sexual and asexual...
2.
Chen W, Achakkagari S, Stromvik M
Front Plant Sci
. 2022 Nov;
13:1011948.
PMID: 36407635
Plastome sequence data is most often extracted from plant whole genome sequencing data and need to be assembled and annotated separately from the nuclear genome sequence. In projects comprising multiple...
3.
Achakkagari S, Kyriakidou M, Gardner K, De Koeyer D, De Jong H, Stromvik M, et al.
Front Plant Sci
. 2022 Aug;
13:954933.
PMID: 36003817
Cultivated potato is a vegetatively propagated crop, and most varieties are autotetraploid with high levels of heterozygosity. Reducing the ploidy and breeding potato at the diploid level can increase efficiency...
4.
Tavares J, Achakkagari S, Archambault A, Stromvik M
Genome
. 2022 Mar;
65(5):301-313.
PMID: 35245153
Anatomical and physiological specializations for plant adaptation to harsh climates result from molecular mechanisms that can be encoded in the nucleus or organelle. In this study, the complete plastomes of...
5.
Hoopes G, Meng X, Hamilton J, Achakkagari S, de Alves Freitas Guesdes F, Bolger M, et al.
Mol Plant
. 2022 Jan;
15(3):520-536.
PMID: 35026436
Cultivated potato is a clonally propagated autotetraploid species with a highly heterogeneous genome. Phased assemblies of six cultivars including two chromosome-scale phased genome assemblies revealed extensive allelic diversity, including altered...
6.
Achakkagari S, Tai H, Davidson C, De Jong H, Stromvik M
DNA Res
. 2021 Jul;
28(4).
PMID: 34254134
The potato mitogenome is complex and to understand various biological functions and nuclear-cytoplasmic interactions, it is important to characterize its gene content and structure. In this study, the complete mitogenome...
7.
Achakkagari S, Bozan I, Anglin N, Ellis D, Tai H, Stromvik M
Mitochondrial DNA B Resour
. 2021 Apr;
6(3):894-897.
PMID: 33796671
Mitochondrial DNA is maternally inherited and is shown to affect nuclear-cytoplasmic interactions in potato. Analyzing the mitogenome helps understand the evolutionary relationships and improve breeding programs in potato. We report...
8.
Achakkagari S, Tai H, Davidson C, De Jong H, Stromvik M
Mitochondrial DNA B Resour
. 2021 Mar;
6(3):811-813.
PMID: 33763586
Potato ( L.) is the world's fourth most important food crop and essential for global food security. The potato chloroplast genomes, the plastomes, are highly conserved and are largely studied...
9.
Achakkagari S, Kyriakidou M, Tai H, Anglin N, Ellis D, Stromvik M
PLoS One
. 2020 Oct;
15(10):e0240124.
PMID: 33031462
The chloroplasts are a crucial part of photosynthesizing plant cells and are extensively utilized in phylogenetic studies mainly due to their maternal inheritance. Characterization and analysis of complete plastome sequences...
10.
Kyriakidou M, Achakkagari S, Galvez Lopez J, Zhu X, Tang C, Tai H, et al.
Theor Appl Genet
. 2020 Jan;
133(3):951-966.
PMID: 31893289
Twelve potato accessions were selected to represent two principal views on potato taxonomy. The genomes were sequenced and analyzed for structural variation (copy number variation) against three published potato genomes....