Ruth Grene
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Explore the profile of Ruth Grene including associated specialties, affiliations and a list of published articles.
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33
Citations
852
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Recent Articles
11.
Aghamirzaie D, Collakova E, Li S, Grene R
BMC Genomics
. 2016 Oct;
17(1):845.
PMID: 27793091
Background: Alternative splicing has been proposed to increase transcript diversity and protein plasticity in eukaryotic organisms, but the extent to which this is the case is currently unclear, especially with...
12.
Schneider A, Aghamirzaie D, Elmarakeby H, Poudel A, Koo A, Heath L, et al.
Plant J
. 2015 Dec;
85(2):305-19.
PMID: 26678037
Developing Arabidopsis seeds accumulate oils and seed storage proteins synthesized by the pathways of primary metabolism. Seed development and metabolism are positively regulated by transcription factors belonging to the LAFL...
13.
Aghamirzaie D, Batra D, Heath L, Schneider A, Grene R, Collakova E
BMC Genomics
. 2015 Nov;
16:928.
PMID: 26572793
Background: Transcriptomics reveals the existence of transcripts of different coding potential and strand orientation. Alternative splicing (AS) can yield proteins with altered number and types of functional domains, suggesting the...
14.
Nilsen E, Freeman J, Grene R, Tokuhisa J
PLoS One
. 2014 Dec;
9(12):e115380.
PMID: 25531435
The development of water stress resistant lines of commercial tomato by breeding or genetic engineering is possible, but will take considerable time before commercial varieties are available for production. However,...
15.
Collakova E, Aghamirzaie D, Fang Y, Klumas C, Tabataba F, Kakumanu A, et al.
Metabolites
. 2014 Jun;
3(2):347-72.
PMID: 24957996
Soybean (Glycine max) seeds are an important source of seed storage compounds, including protein, oil, and sugar used for food, feed, chemical, and biofuel production. We assessed detailed temporal transcriptional...
16.
Aghamirzaie D, Nabiyouni M, Fang Y, Klumas C, Heath L, Grene R, et al.
Biology (Basel)
. 2014 May;
2(4):1311-37.
PMID: 24833227
Developing soybean seeds accumulate oils, proteins, and carbohydrates that are used as oxidizable substrates providing metabolic precursors and energy during seed germination. The accumulation of these storage compounds in developing...
17.
Collakova E, Klumas C, Suren H, Myers E, Heath L, Holliday J, et al.
BMC Plant Biol
. 2013 May;
13:72.
PMID: 23631437
Background: Cold acclimation in woody perennials is a metabolically intensive process, but coincides with environmental conditions that are not conducive to the generation of energy through photosynthesis. While the negative...
18.
Grene R, Klumas C, Suren H, Yang K, Collakova E, Myers E, et al.
Front Plant Sci
. 2012 Nov;
3:241.
PMID: 23112803
Microarray gene expression profiling is a powerful technique to understand complex developmental processes, but making biologically meaningful inferences from such studies has always been challenging. We previously reported a microarray...
19.
Kakumanu A, Ambavaram M, Klumas C, Krishnan A, Batlang U, Myers E, et al.
Plant Physiol
. 2012 Jul;
160(2):846-67.
PMID: 22837360
Drought stress affects cereals especially during the reproductive stage. The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf...
20.
Goff S, Vaughn M, McKay S, Lyons E, Stapleton A, Gessler D, et al.
Front Plant Sci
. 2012 May;
2:34.
PMID: 22645531
The iPlant Collaborative (iPlant) is a United States National Science Foundation (NSF) funded project that aims to create an innovative, comprehensive, and foundational cyberinfrastructure in support of plant biology research...