Riza Batista-Navarro
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Explore the profile of Riza Batista-Navarro including associated specialties, affiliations and a list of published articles.
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16
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180
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Recent Articles
1.
Alhassan A, Schlegel V, Aloud M, Batista-Navarro R, Nenadic G
J Biomed Inform
. 2025 Jan;
162:104783.
PMID: 39863246
Objective: Extracting named entities from clinical free-text presents unique challenges, particularly when dealing with discontinuous entities-mentions that are separated by unrelated words. Traditional NER methods often struggle to accurately identify...
2.
From outputs to insights: a survey of rationalization approaches for explainable text classification
Mendez Guzman E, Schlegel V, Batista-Navarro R
Front Artif Intell
. 2024 Aug;
7:1363531.
PMID: 39109323
Deep learning models have achieved state-of-the-art performance for text classification in the last two decades. However, this has come at the expense of models becoming less understandable, limiting their application...
3.
Gabud R, Lapitan P, Mariano V, Mendoza E, Pampolina N, Clarino M, et al.
Front Artif Intell
. 2024 Jun;
7:1371411.
PMID: 38845683
Introduction: Fine-grained, descriptive information on habitats and reproductive conditions of plant species are crucial in forest restoration and rehabilitation efforts. Precise timing of fruit collection and knowledge of species' habitat...
4.
Civan P, Ali S, Batista-Navarro R, Drosou K, Ihejieto C, Chakraborty D, et al.
Genome Biol Evol
. 2019 Feb;
11(3):832-843.
PMID: 30793171
The aromatic group of Asian cultivated rice is a distinct population with considerable genetic diversity on the Indian subcontinent and includes the popular Basmati types characterized by pleasant fragrance. Genetic...
5.
Thompson P, Daikou S, Ueno K, Batista-Navarro R, Tsujii J, Ananiadou S
J Cheminform
. 2018 Aug;
10(1):37.
PMID: 30105604
Pharmacovigilance (PV) databases record the benefits and risks of different drugs, as a means to ensure their safe and effective use. Creating and maintaining such resources can be complex, since...
6.
Shardlow M, Batista-Navarro R, Thompson P, Nawaz R, McNaught J, Ananiadou S
BMC Med Inform Decis Mak
. 2018 Jun;
18(1):46.
PMID: 29940927
Background: Text mining (TM) methods have been used extensively to extract relations and events from the literature. In addition, TM techniques have been used to extract various types or dimensions...
7.
Soto A, Zerva C, Batista-Navarro R, Ananiadou S
Bioinformatics
. 2017 Dec;
34(8):1389-1397.
PMID: 29228271
Motivation: Pathway models are valuable resources that help us understand the various mechanisms underpinning complex biological processes. Their curation is typically carried out through manual inspection of published scientific literature...
8.
Zerva C, Batista-Navarro R, Day P, Ananiadou S
Bioinformatics
. 2017 Oct;
33(23):3784-3792.
PMID: 29036627
Motivation: In recent years, there has been great progress in the field of automated curation of biomedical networks and models, aided by text mining methods that provide evidence from literature....
9.
Venkatesan A, Kim J, Talo F, Ide-Smith M, Gobeill J, Carter J, et al.
Wellcome Open Res
. 2017 Sep;
1:25.
PMID: 28948232
The tremendous growth in biological data has resulted in an increase in the number of research papers being published. This presents a great challenge for scientists in searching and assimilating...
10.
Swainston N, Batista-Navarro R, Carbonell P, Dobson P, Dunstan M, Jervis A, et al.
PLoS One
. 2017 Jul;
12(7):e0179130.
PMID: 28708831
Biologists and biochemists have at their disposal a number of excellent, publicly available data resources such as UniProt, KEGG, and NCBI Taxonomy, which catalogue biological entities. Despite the usefulness of...