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Peter Hansen

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Articles 65
Citations 878
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Recent Articles
1.
Matentzoglu N, Bello S, Stefancsik R, Alghamdi S, Anagnostopoulos A, Balhoff J, et al.
Genetics . 2025 Mar; PMID: 40048704
Phenotypic data are critical for understanding biological mechanisms and consequences of genomic variation, and are pivotal for clinical use cases such as disease diagnostics and treatment development. For over a...
2.
Rao- K, Rao K, Baer A, Bapat V, Piazza N, Hansen P, et al.
EuroIntervention . 2024 Dec; 20(24):e1493-e1504. PMID: 39676551
Transcatheter aortic valve implantation (TAVI) is a safe and effective procedure for the treatment of aortic stenosis. With the recently broadened indications, there is a larger cohort of patients likely...
3.
Karlebach G, Hansen P, Kohler K, Robinson P
NAR Genom Bioinform . 2024 Dec; 6(4):lqae165. PMID: 39660256
Gene Ontology overrepresentation analysis (GO-ORA) is a standard approach towards characterizing salient functional characteristics of sets of differentially expressed genes (DGE) in RNA sequencing (RNA-seq) experiments. GO-ORA compares the distribution...
4.
Hansen P, Blau H, Hecht J, Karlebach G, Krannich A, Steinhaus R, et al.
NAR Genom Bioinform . 2024 Dec; 6(4):lqae156. PMID: 39660253
Hi-C and capture Hi-C (CHi-C) both leverage paired-end sequencing of chimeric fragments to gauge the strength of interactions based on the total number of paired-end reads mapped to a common...
5.
Jorgensen S, Aagaard P, Bohn M, Hansen P, Hansen P, Holm C, et al.
Scand J Med Sci Sports . 2024 Oct; 34(11):e14750. PMID: 39461901
Primary Outcome: 30-s sit to stand (30STS). Secondary Outcomes: Timed Up&Go, 40-m walk test (40mWT), knee range of motion (ROM) 1-repetition maximum (1RM) leg press and knee extensor strength, maximal...
6.
Danis D, Bamshad M, Bridges Y, Caballero-Oteyza A, Cacheiro P, Carmody L, et al.
HGG Adv . 2024 Oct; 6(1):100371. PMID: 39394689
The Global Alliance for Genomics and Health (GA4GH) Phenopacket Schema was released in 2022 and approved by ISO as a standard for sharing clinical and genomic information about an individual,...
7.
Matentzoglu N, Bello S, Stefancsik R, Alghamdi S, Anagnostopoulos A, Balhoff J, et al.
bioRxiv . 2024 Sep; PMID: 39345458
Phenotypic data are critical for understanding biological mechanisms and consequences of genomic variation, and are pivotal for clinical use cases such as disease diagnostics and treatment development. For over a...
8.
Rao K, Chan B, Baer A, Hansen P, Bhindi R
CJC Open . 2024 Apr; 6(2Part A):86-95. PMID: 38585677
Background: High-grade atrioventricular block (HGAVB) is common after transcatheter aortic valve implantation (TAVI), often necessitating permanent pacemaker (PPM) implantation. Delayed HGAVB has varying definitions but typically refers to onset 48...
9.
Cappelletti L, Rekerle L, Fontana T, Hansen P, Casiraghi E, Ravanmehr V, et al.
Bioinform Adv . 2024 Apr; 4(1):vbae036. PMID: 38577542
Motivation: Graph representation learning is a family of related approaches that learn low-dimensional vector representations of nodes and other graph elements called embeddings. Embeddings approximate characteristics of the graph and...
10.
Linderman M, Wallace J, van der Heyde A, Wieman E, Brey D, Shi Y, et al.
Bioinformatics . 2024 Mar; 40(3). PMID: 38444093
Motivation: Structural variants (SVs) play a causal role in numerous diseases but can be difficult to detect and accurately genotype (determine zygosity) with short-read genome sequencing data (SRS). Improving SV...