Oleg Simakov
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Explore the profile of Oleg Simakov including associated specialties, affiliations and a list of published articles.
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78
Citations
4786
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Recent Articles
1.
Shimada Y, Aydin B, Kon-Nanjo K, Handayani K, Gultom V, Simakov O, et al.
Zoological Lett
. 2025 Feb;
11(1):3.
PMID: 40016791
Garra rufa, commonly known as the "doctor fish", is a freshwater cyprinid native to warm regions of the Middle East. Since the late twentieth century, it has been widely utilized...
2.
Schartl M, Woltering J, Irisarri I, Du K, Kneitz S, Pippel M, et al.
Nature
. 2024 Aug;
634(8032):96-103.
PMID: 39143221
The genomes of living lungfishes can inform on the molecular-developmental basis of the Devonian sarcopterygian fish-tetrapod transition. We de novo sequenced the genomes of the African (Protopterus annectens) and South...
3.
Mutemi K, Simakov O, Pan L, Santangeli L, Null R, Handberg-Thorsager M, et al.
bioRxiv
. 2024 Jul;
PMID: 38948846
The marine annelid is a model organism used in many research areas including evolution and development, neurobiology, ecology and regeneration. Here we present the genomes of (laboratory culture reference and...
4.
Schultz D, Heath-Heckman E, Winchell C, Kuo D, Yu Y, Oberauer F, et al.
bioRxiv
. 2024 May;
PMID: 38798472
Comparisons of multiple metazoan genomes have revealed the existence of ancestral linkage groups (ALGs), genomic scaffolds sharing sets of orthologous genes that have been inherited from ancestral animals for hundreds...
5.
Saunders P, Ferre-Ortega C, Hill P, Simakov O, Ezaz T, Burridge C, et al.
Genome Biol Evol
. 2024 Mar;
16(4).
PMID: 38526014
To understand the biology of a species, it is often crucial to be able to differentiate males and females. However, many species lack easily identifiable sexually dimorphic traits. In those...
6.
Schnitzler C, Chang E, Waletich J, Quiroga-Artigas G, Wong W, Nguyen A, et al.
Genome Res
. 2024 Mar;
34(3):498-513.
PMID: 38508693
is a colonial marine hydroid that shows remarkable biological properties, including the capacity to regenerate its entire body throughout its lifetime, a process made possible by its adult migratory stem...
7.
Marletaz F, Timoshevskaya N, Timoshevskiy V, Parey E, Simakov O, Gavriouchkina D, et al.
Nature
. 2024 Jan;
627(8005):811-820.
PMID: 38262590
As the only surviving lineages of jawless fishes, hagfishes and lampreys provide a crucial window into early vertebrate evolution. Here we investigate the complex history, timing and functional role of...
8.
Rogers T, Yalcin G, Briseno J, Vijayan N, Nyholm S, Simakov O
Sci Data
. 2024 Jan;
11(1):40.
PMID: 38184621
Coleoid cephalopods possess numerous complex, species-specific morphological and behavioural adaptations, e.g., a uniquely structured nervous system that is the largest among the invertebrates. The Hawaiian bobtail squid (Euprymna scolopes) is...
9.
Zimmermann B, Montenegro J, Robb S, Fropf W, Weilguny L, He S, et al.
Nat Commun
. 2023 Dec;
14(1):8270.
PMID: 38092765
There is currently little information about the evolution of gene clusters, genome architectures and karyotypes in early branching animals. Slowly evolving anthozoan cnidarians can be particularly informative about the evolution...
10.
Destanovic D, Schultz D, Styfhals R, Cruz F, Gomez-Garrido J, Gut M, et al.
G3 (Bethesda)
. 2023 Oct;
13(12).
PMID: 37850903
Cephalopods are emerging animal models and include iconic species for studying the link between genomic innovations and physiological and behavioral complexities. Coleoid cephalopods possess the largest nervous system among invertebrates,...