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Nozomi Ando

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Articles 60
Citations 850
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Recent Articles
1.
Xu D, Thomas W, Burnim A, Ando N
Nat Commun . 2025 Mar; 16(1):2458. PMID: 40075098
Understanding the structural dynamics associated with enzymatic catalysis has been a long-standing goal of biochemistry. With the advent of modern cryo-electron microscopy (cryo-EM), it has become conceivable to redefine a...
2.
Saito-Abe M, Toyokuni K, Ogasawara H, Pak K, Inuzuka Y, Harama D, et al.
Clin Exp Allergy . 2024 Dec; PMID: 39692192
No abstract available.
3.
Miller R, Patterson M, Bhatt N, Pei X, Ando N
bioRxiv . 2024 Nov; PMID: 39605687
Discovered nearly 70 years ago, the allosteric regulation of aspartate transcarbamoylase (ATCase) is discussed in every biochemistry textbook. ATCase catalyzes the first step in pyrimidine biosynthesis. Despite extensive research, the...
4.
Meisburger S, Ando N
Acta Crystallogr D Struct Biol . 2024 Apr; 80(Pt 5):299-313. PMID: 38606664
Diffuse scattering is a promising method to gain additional insight into protein dynamics from macromolecular crystallography experiments. Bragg intensities yield the average electron density, while the diffuse scattering can be...
5.
Xu D, Ando N
J Struct Biol . 2024 Mar; 216(2):108072. PMID: 38431179
Efficient and high-accuracy filtering of cryo-electron microscopy (cryo-EM) micrographs is an emerging challenge with the growing speed of data collection and sizes of datasets. Convolutional neural networks (CNNs) are machine...
6.
Xu D, Ando N
bioRxiv . 2024 Feb; PMID: 38405773
Efficient and high-accuracy filtering of cryo-electron microscopy (cryo-EM) micrographs is an emerging challenge with the growing speed of data collection and sizes of datasets. Convolutional neural networks (CNNs) are machine...
7.
Meisburger S, Ando N
bioRxiv . 2024 Jan; PMID: 38293202
Diffuse scattering is a promising method to gain additional insight into protein dynamics from macromolecular crystallography (MX) experiments. Bragg intensities yield the average electron density, while the diffuse scattering can...
8.
Sun X, Alfermann J, Li H, Watkins M, Chen Y, Morrell T, et al.
Nat Chem . 2023 Dec; 16(2):259-268. PMID: 38049653
Many peptide-derived natural products are produced by non-ribosomal peptide synthetases (NRPSs) in an assembly-line fashion. Each amino acid is coupled to a designated peptidyl carrier protein (PCP) through two distinct...
9.
Nam D, Bacik J, Khade R, Aguilera M, Wei Y, Villada J, et al.
Nat Commun . 2023 Dec; 14(1):7985. PMID: 38042860
Hemoproteins have recently emerged as promising biocatalysts for new-to-nature carbene transfer reactions. However, mechanistic understanding of the interplay between productive and unproductive pathways in these processes is limited. Using spectroscopic,...
10.
Fukuda M, Sakai H, Koh K, Sakuraba S, Ando N, Hayashida M, et al.
JA Clin Rep . 2023 Oct; 9(1):65. PMID: 37803183
Background: We report a case in which veno-venous extracorporeal membrane oxygenation (V-V ECMO) saved the life of a patient who developed severe hypoxemia due to unusual unilateral pulmonary edema (UPE)...