Matthieu Barba
Overview
Explore the profile of Matthieu Barba including associated specialties, affiliations and a list of published articles.
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11
Citations
901
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Recent Articles
1.
Dyer S, Austine-Orimoloye O, Azov A, Barba M, Barnes I, Barrera-Enriquez V, et al.
Nucleic Acids Res
. 2024 Dec;
53(D1):D948-D957.
PMID: 39656687
Ensembl (www.ensembl.org) is an open platform integrating publicly available genomics data across the tree of life with a focus on eukaryotic species related to human health, agriculture and biodiversity. This...
2.
Haas D, Barba M, Vicente C, Nezbedova S, Garenaux A, Bury-Mone S, et al.
NAR Genom Bioinform
. 2024 Jun;
6(2):lqae069.
PMID: 38915823
Microbial specialized metabolite biosynthetic gene clusters (SMBGCs) are a formidable source of natural products of pharmaceutical interest. With the multiplication of genomic data available, very efficient bioinformatic tools for automatic...
3.
Alvarez-Jarreta J, Amos B, Aurrecoechea C, Bah S, Barba M, Barreto A, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D808-D816.
PMID: 37953350
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) is a Bioinformatics Resource Center funded by the National Institutes of Health with additional funding from the Wellcome Trust. VEuPathDB...
4.
Harrison P, Amode M, Austine-Orimoloye O, Azov A, Barba M, Barnes I, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D891-D899.
PMID: 37953337
Ensembl (https://www.ensembl.org) is a freely available genomic resource that has produced high-quality annotations, tools, and services for vertebrates and model organisms for more than two decades. In recent years, there...
5.
Yates A, Allen J, Amode R, Azov A, Barba M, Becerra A, et al.
Nucleic Acids Res
. 2021 Nov;
50(D1):D996-D1003.
PMID: 34791415
Ensembl Genomes (https://www.ensemblgenomes.org) provides access to non-vertebrate genomes and analysis complementing vertebrate resources developed by the Ensembl project (https://www.ensembl.org). The two resources collectively present genome annotation through a consistent set...
6.
Amos B, Aurrecoechea C, Barba M, Barreto A, Basenko E, Bazant W, et al.
Nucleic Acids Res
. 2021 Oct;
50(D1):D898-D911.
PMID: 34718728
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) represents the 2019 merger of VectorBase with the EuPathDB projects. As a Bioinformatics Resource Center funded by the National Institutes...
7.
Howe K, Contreras-Moreira B, De Silva N, Maslen G, Akanni W, Allen J, et al.
Nucleic Acids Res
. 2019 Oct;
48(D1):D689-D695.
PMID: 31598706
Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the context of the Ensembl project (http://www.ensembl.org). Together, the...
8.
Kersey P, Allen J, Allot A, Barba M, Boddu S, Bolt B, et al.
Nucleic Acids Res
. 2017 Nov;
46(D1):D802-D808.
PMID: 29092050
Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the Ensembl project (http://www.ensembl.org). Together, the two resources provide...
9.
Barba M, Dutoit R, Legrain C, Labedan B
BMC Syst Biol
. 2013 Oct;
7:99.
PMID: 24093154
Background: Enzymes belonging to mechanistically diverse superfamilies often display similar catalytic mechanisms. We previously observed such an association in the case of the cyclic amidohydrolase superfamily whose members play a...
10.
Barba M, Glansdorff N, Labedan B
J Mol Evol
. 2013 Aug;
77(3):70-80.
PMID: 23979262
Dihydroorotases are universal proteins catalyzing the third step of pyrimidine biosynthesis. These zinc metalloenzymes belong to the superfamily of cyclic amidohydrolases, comprising also other enzymes that are involved in degradation...