Matthew A Conte
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Explore the profile of Matthew A Conte including associated specialties, affiliations and a list of published articles.
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43
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1114
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Recent Articles
11.
Thommana A, Shakya M, Gandhi J, Fung C, Chain P, Berry I, et al.
bioRxiv
. 2022 Aug;
PMID: 36032969
Despite unprecedented global sequencing and surveillance of SARS-CoV-2, timely identification of the emergence and spread of novel variants of concern (VoCs) remains a challenge. Several million raw genome sequencing runs...
12.
Berry I, Hang J, Fung C, Yang Y, Chibucos M, Pollio A, et al.
BMC Genomics
. 2022 Jul;
23(1):513.
PMID: 35840884
Background: With the emergence and spread of SARS-CoV-2 variants, genomic epidemiology and surveillance have proven invaluable tools for variant tracking. Here, we analyzed SARS-CoV-2 samples collected from personnel located at...
13.
Gammerdinger W, Conte M, Sandkam B, Penman D, Kocher T
Hydrobiologia
. 2022 Jun;
832(1):397-408.
PMID: 35665074
The African cichlid radiations have created thousands of new cichlid species with a wide diversity of trophic morphologies, behaviors, sensory systems and pigment patterns. In addition, recent research has uncovered...
14.
Kocher T, Behrens K, Conte M, Aibara M, Mrosso H, Green E, et al.
Genes (Basel)
. 2022 May;
13(5).
PMID: 35627189
African cichlid fishes harbor an extraordinary diversity of sex-chromosome systems. Within just one lineage, the tribe Haplochromini, at least 6 unique sex-chromosome systems have been identified. Here we focus on...
15.
Pollett S, Conte M, Sanborn M, Jarman R, Lidl G, Modjarrad K, et al.
Sci Rep
. 2021 Aug;
11(1):17365.
PMID: 34462471
The SARS-CoV-2 pandemic prompts evaluation of recombination in human coronavirus (hCoV) evolution. We undertook recombination analyses of 158,118 public seasonal hCoV, SARS-CoV-1, SARS-CoV-2 and MERS-CoV genome sequences using the RDP4...
16.
Conte M, Clark F, Roberts R, Xu L, Tao W, Zhou Q, et al.
Mol Biol Evol
. 2020 Dec;
38(4):1554-1569.
PMID: 33300980
Chromosome size and morphology vary within and among species, but little is known about the proximate or ultimate causes of these differences. Cichlid fish species in the tribe Oreochromini share...
17.
Tao W, Conte M, Wang D, Kocher T
Bioessays
. 2020 Dec;
43(3):e2000161.
PMID: 33283342
Recent studies have revealed an astonishing diversity of sex chromosomes in many vertebrate lineages, prompting questions about the mechanisms of sex chromosome turnover. While there is considerable population genetic theory...
18.
Carleton K, Conte M, Malinsky M, Nandamuri S, Sandkam B, Meier J, et al.
Mol Ecol
. 2020 Oct;
29(24):4956-4969.
PMID: 33049090
African cichlid fishes are a prime model for studying speciation mechanisms. Despite the development of extensive genomic resources, it has been difficult to determine which sources of genetic variation are...
19.
Triay C, Conte M, Baroiller J, Bezault E, Clark F, Penman D, et al.
Genes (Basel)
. 2020 Sep;
11(9).
PMID: 32872430
In domesticated strains of the Nile tilapia, phenotypic sex has been linked to genetic variants on linkage groups 1, 20 and 23. This diversity of sex-loci might reflect a naturally...
20.
Sandkam B, Campello L, OBrien C, Nandamuri S, Gammerdinger W, Conte M, et al.
Mol Biol Evol
. 2020 Mar;
37(7):2002-2014.
PMID: 32191319
Sensory systems are tuned by selection to maximize organismal fitness in particular environments. This tuning has implications for intraspecies communication, the maintenance of species boundaries, and speciation. Tuning of color...