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Maneesha S Saxena

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Articles 13
Citations 457
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Recent Articles
1.
Kumar V, Yadav M, Awala S, Valombola J, Saxena M, Ahmad F, et al.
Planta . 2024 Sep; 260(4):101. PMID: 39302511
Millets are important food source to ensure global food and nutritional security and are associated with health benefits. Millets have emerged as a nutritional powerhouse with the potential to address...
2.
Das S, Singh M, Srivastava R, Bajaj D, Saxena M, Rana J, et al.
DNA Res . 2015 Dec; 23(1):53-65. PMID: 26685680
The present study used a whole-genome, NGS resequencing-based mQTL-seq (multiple QTL-seq) strategy in two inter-specific mapping populations (Pusa 1103 × ILWC 46 and Pusa 256 × ILWC 46) to scan...
3.
Upadhyaya H, Bajaj D, Das S, Saxena M, Badoni S, Kumar V, et al.
Plant Mol Biol . 2015 Sep; 89(4-5):403-20. PMID: 26394865
A combinatorial approach of candidate gene-based association analysis and genome-wide association study (GWAS) integrated with QTL mapping, differential gene expression profiling and molecular haplotyping was deployed in the present study...
4.
Kujur A, Bajaj D, Upadhyaya H, Das S, Ranjan R, Shree T, et al.
Sci Rep . 2015 Jun; 5:11166. PMID: 26058368
We identified 44844 high-quality SNPs by sequencing 92 diverse chickpea accessions belonging to a seed and pod trait-specific association panel using reference genome- and de novo-based GBS (genotyping-by-sequencing) assays. A...
5.
Khajuria Y, Saxena M, Gaur R, Chattopadhyay D, Jain M, Parida S, et al.
PLoS One . 2015 May; 10(5):e0125583. PMID: 25974327
The identification of informative in silico polymorphic genomic and genic microsatellite markers by comparing the genome and transcriptome sequences of crop genotypes is a rapid, cost-effective and non-laborious approach for...
6.
Kujur A, Upadhyaya H, Shree T, Bajaj D, Das S, Saxena M, et al.
Sci Rep . 2015 May; 5:9468. PMID: 25942004
We discovered 26785 and 16573 high-quality SNPs differentiating two parental genotypes of a RIL mapping population using reference desi and kabuli genome-based GBS assay. Of these, 3625 and 2177 SNPs...
7.
Kujur A, Bajaj D, Upadhyaya H, Das S, Ranjan R, Shree T, et al.
Front Plant Sci . 2015 Apr; 6:162. PMID: 25873920
The genome-wide discovery and high-throughput genotyping of SNPs in chickpea natural germplasm lines is indispensable to extrapolate their natural allelic diversity, domestication, and linkage disequilibrium (LD) patterns leading to the...
8.
Bajaj D, Saxena M, Kujur A, Das S, Badoni S, Tripathi S, et al.
J Exp Bot . 2014 Dec; 66(5):1271-90. PMID: 25504138
Phylogenetic footprinting identified 666 genome-wide paralogous and orthologous CNMS (conserved non-coding microsatellite) markers from 5'-untranslated and regulatory regions (URRs) of 603 protein-coding chickpea genes. The (CT)n and (GA)n CNMS carrying...
9.
Saxena M, Bajaj D, Das S, Kujur A, Kumar V, Singh M, et al.
DNA Res . 2014 Oct; 21(6):695-710. PMID: 25335477
The identification and fine mapping of robust quantitative trait loci (QTLs)/genes governing important agro-morphological traits in chickpea still lacks systematic efforts at a genome-wide scale involving wild Cicer accessions. In...
10.
Saxena M, Bajaj D, Kujur A, Das S, Badoni S, Kumar V, et al.
PLoS One . 2014 Sep; 9(9):e107484. PMID: 25222488
Characterization of natural allelic diversity and understanding the genetic structure and linkage disequilibrium (LD) pattern in wild germplasm accessions by large-scale genotyping of informative microsatellite and single nucleotide polymorphism (SNP)...