Krishna Palaniappan
Overview
Explore the profile of Krishna Palaniappan including associated specialties, affiliations and a list of published articles.
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Articles
179
Citations
5209
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Recent Articles
1.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, et al.
Nat Biotechnol
. 2021 Apr;
39(4):521.
PMID: 33795890
No abstract available.
2.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, et al.
Nat Biotechnol
. 2020 Nov;
39(4):520.
PMID: 33208936
No abstract available.
3.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, et al.
Nat Biotechnol
. 2020 Nov;
39(4):499-509.
PMID: 33169036
The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has enabled insights into the ecology and evolution of environmental and host-associated microbiomes. Here we applied this approach to >10,000...
4.
Roux S, Paez-Espino D, Chen I, Palaniappan K, Ratner A, Chu K, et al.
Nucleic Acids Res
. 2020 Nov;
49(D1):D764-D775.
PMID: 33137183
Viruses are integral components of all ecosystems and microbiomes on Earth. Through pervasive infections of their cellular hosts, viruses can reshape microbial community structure and drive global nutrient cycling. Over...
5.
Paez-Espino D, Roux S, Chen I, Palaniappan K, Ratner A, Chu K, et al.
Nucleic Acids Res
. 2018 Nov;
47(D1):D678-D686.
PMID: 30407573
The Integrated Microbial Genome/Virus (IMG/VR) system v.2.0 (https://img.jgi.doe.gov/vr/) is the largest publicly available data management and analysis platform dedicated to viral genomics. Since the last report published in the 2016,...
6.
Chen I, Chu K, Palaniappan K, Pillay M, Ratner A, Huang J, et al.
Nucleic Acids Res
. 2018 Oct;
47(D1):D666-D677.
PMID: 30289528
The Integrated Microbial Genomes & Microbiomes system v.5.0 (IMG/M: https://img.jgi.doe.gov/m/) contains annotated datasets categorized into: archaea, bacteria, eukarya, plasmids, viruses, genome fragments, metagenomes, cell enrichments, single particle sorts, and metatranscriptomes....
7.
Rice M, Norton J, Stein L, Kozlowski J, Bollmann A, Klotz M, et al.
Genome Announc
. 2017 Mar;
5(11).
PMID: 28302769
ATCC 49181 is a cold-tolerant marine ammonia-oxidizing bacterium isolated from seawater collected in the Gulf of Alaska. The high-quality complete genome contains a 2.87-Mbp chromosome and a 56.6-kbp plasmid. Chemolithoautotrophic...
8.
Hadjithomas M, Chen I, Chu K, Huang J, Ratner A, Palaniappan K, et al.
Nucleic Acids Res
. 2016 Dec;
45(D1):D560-D565.
PMID: 27903896
Secondary metabolites produced by microbes have diverse biological functions, which makes them a great potential source of biotechnologically relevant compounds with antimicrobial, anti-cancer and other activities. The proteins needed to...
9.
Paez-Espino D, Chen I, Palaniappan K, Ratner A, Chu K, Szeto E, et al.
Nucleic Acids Res
. 2016 Nov;
45(D1):D457-D465.
PMID: 27799466
Viruses represent the most abundant life forms on the planet. Recent experimental and computational improvements have led to a dramatic increase in the number of viral genome sequences identified primarily...
10.
Chen I, Markowitz V, Chu K, Palaniappan K, Szeto E, Pillay M, et al.
Nucleic Acids Res
. 2016 Oct;
45(D1):D507-D516.
PMID: 27738135
The Integrated Microbial Genomes with Microbiome Samples (IMG/M: https://img.jgi.doe.gov/m/) system contains annotated DNA and RNA sequence data of (i) archaeal, bacterial, eukaryotic and viral genomes from cultured organisms, (ii) single...