Jurgen Schmitz
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Explore the profile of Jurgen Schmitz including associated specialties, affiliations and a list of published articles.
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84
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3222
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Recent Articles
1.
Frankenberg S, Lucas S, Feigin C, Doronina L, Steffen R, Hartley G, et al.
Sci Adv
. 2025 Jan;
11(1):eado4140.
PMID: 39742480
The marsupial moles are arguably Australia's most enigmatic marsupials. Almost indistinguishable from placental (eutherian) moles, they provide a striking example of convergent evolution. Exploring the genome of the southern marsupial...
2.
Ogoniak L, Steffen R, Grundmann N, Stover B, Muller K, Schmitz J
J Hered
. 2024 Feb;
115(2):183-187.
PMID: 38306501
Large-scale selection analyses of protein-coding sequences and phylogenetic tree reconstructions require suitable trees in Newick format. We developed the NewickTreeModifier (NTM), a simple web-based tool to trim and modify Newick...
3.
Doronina L, Ogoniak L, Schmitz J
Genes (Basel)
. 2023 Sep;
14(9).
PMID: 37761970
Retrotransposon insertion patterns facilitate a virtually homoplasy-free picture of phylogenetic history. Still, a few most likely random parallel insertions or deletions result in rare cases of homoplasy in primates. The...
4.
Churakov G, Kuritzin A, Chukharev K, Zhang F, Wunnemann F, Ulyantsev V, et al.
Syst Biol
. 2023 Jan;
72(3):649-661.
PMID: 36688484
Retrophylogenomics makes use of genome-wide retrotransposon presence/absence insertion patterns to resolve questions in phylogeny and population genetics. In the genomics era, evaluating high-throughput data requires the associated development of appropriately...
5.
Dornte C, Traska V, Jansen N, Kostyra J, Baurmann H, Lauer G, et al.
Commun Med (Lond)
. 2022 Nov;
2(1):140.
PMID: 36352067
Background: The SARS-CoV-2 variant B.1.1.529 potentially escapes immunity from vaccination via a heavily mutated Spike protein. Here, we analyzed whether T cell memory towards the B.1.1.529 Spike protein is present...
6.
Zhang F, Raabe C, Cardoso-Moreira M, Brosius J, Kaessmann H, Schmitz J
Genomics
. 2022 Jul;
114(4):110434.
PMID: 35863675
Advances in RNA high-throughput sequencing and large-scale functional assays yield new insights into the multifaceted activities of transposed elements (TE) and many other previously undiscovered sequence elements. Currently, no tool...
7.
Steffen R, Ogoniak L, Grundmann N, Pawluchin A, Soehnlein O, Schmitz J
Genes (Basel)
. 2022 Jun;
13(6).
PMID: 35741852
Evolution is change over time. Although neutral changes promoted by drift effects are most reliable for phylogenetic reconstructions, selection-relevant changes are of only limited use to reconstruct phylogenies. On the...
8.
Doronina L, Reising O, Clawson H, Churakov G, Schmitz J
Genes (Basel)
. 2022 May;
13(5).
PMID: 35627160
Euarchontoglires, once described as Supraprimates, comprise primates, colugos, tree shrews, rodents, and lagomorphs in a clade that evolved about 90 million years ago (mya) from a shared ancestor with Laurasiatheria....
9.
Doronina L, Hughes G, Moreno-Santillan D, Lawless C, Lonergan T, Ryan L, et al.
Genes (Basel)
. 2022 May;
13(5).
PMID: 35627151
Relationships among laurasiatherian clades represent one of the most highly disputed topics in mammalian phylogeny. In this study, we attempt to disentangle laurasiatherian interordinal relationships using two independent genome-level approaches:...
10.
Doronina L, Feigin C, Schmitz J
Syst Biol
. 2022 Mar;
71(5):1045-1053.
PMID: 35289914
Although first posited to be of a single origin, the two superfamilies of phalangeriform marsupial possums (Phalangeroidea: brushtail possums and cuscuses and Petauroidea: possums and gliders) have long been considered,...