Jonathan Colen
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Explore the profile of Jonathan Colen including associated specialties, affiliations and a list of published articles.
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10
Citations
32
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Recent Articles
1.
Huchthausen C, Shi M, de Sousa G, Colen J, Shelley E, Larner J, et al.
ArXiv
. 2025 Jan;
PMID: 39876938
Background: Conventional methods for detecting lung cancer early are often qualitative and subject to interpretation. Radiomics provides quantitative characteristics of pulmonary nodules (PNs) in medical images, but variability in medical...
2.
Colen J, Poncet A, Bartolo D, Vitelli V
Phys Rev Lett
. 2024 Sep;
133(10):107301.
PMID: 39303226
We present a data-driven pipeline for model building that combines interpretable machine learning, hydrodynamic theories, and microscopic models. The goal is to uncover the underlying processes governing nonlinear dynamics experiments....
3.
Lefebvre M, Colen J, Claussen N, Brauns F, Raich M, Mitchell N, et al.
ArXiv
. 2024 Jun;
PMID: 38855544
Morphogenesis is the process whereby the body of an organism develops its target shape. The morphogen BMP is known to play a conserved role across bilaterian organisms in determining the...
4.
Colen J, Nguyen C, Liyanage S, Aliotta E, Chen J, Alonso C, et al.
Med Phys
. 2024 Jun;
51(9):6485-6500.
PMID: 38837261
Background: Stereotactic body radiation therapy (SBRT) is known to modulate the immune system and contribute to the generation of anti-tumor T cells and stimulate T cell infiltration into tumors. Radiation-induced...
5.
Redford S, Colen J, Shivers J, Zemsky S, Molaei M, Floyd C, et al.
Soft Matter
. 2024 Feb;
20(11):2480-2490.
PMID: 38385209
In active materials, uncoordinated internal stresses lead to emergent long-range flows. An understanding of how the behavior of active materials depends on mesoscopic (hydrodynamic) parameters is developing, but there remains...
6.
Schmitt M, Colen J, Sala S, Devany J, Seetharaman S, Caillier A, et al.
Cell
. 2024 Jan;
187(2):481-494.e24.
PMID: 38194965
Cellular form and function emerge from complex mechanochemical systems within the cytoplasm. Currently, no systematic strategy exists to infer large-scale physical properties of a cell from its molecular components. This...
7.
Lefebvre M, Colen J, Claussen N, Brauns F, Raich M, Mitchell N, et al.
bioRxiv
. 2024 Jan;
PMID: 38187670
Morphogenesis is the process whereby the body of an organism develops its target shape. The morphogen BMP is known to play a conserved role across bilaterian organisms in determining the...
8.
Redford S, Colen J, Shivers J, Zemsky S, Molaei M, Floyd C, et al.
ArXiv
. 2023 Sep;
PMID: 37693184
In active materials, uncoordinated internal stresses lead to emergent long-range flows. An understanding of how the behavior of active materials depends on mesoscopic (hydrodynamic) parameters is developing, but there remains...
9.
Schmitt M, Colen J, Sala S, Devany J, Seetharaman S, Gardel M, et al.
ArXiv
. 2023 Mar;
PMID: 36911285
Cellular form and function emerge from complex mechanochemical systems within the cytoplasm. No systematic strategy currently exists to infer large-scale physical properties of a cell from its many molecular components....
10.
Colen J, Han M, Zhang R, Redford S, Lemma L, Morgan L, et al.
Proc Natl Acad Sci U S A
. 2021 Mar;
118(10).
PMID: 33653956
Hydrodynamic theories effectively describe many-body systems out of equilibrium in terms of a few macroscopic parameters. However, such parameters are difficult to determine from microscopic information. Seldom is this challenge...