John C Matese
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Explore the profile of John C Matese including associated specialties, affiliations and a list of published articles.
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13
Citations
1795
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Recent Articles
1.
Cao C, Lemaire L, Yoon P, Choi Y, Parsons L, Matese J, et al.
Nature
. 2019 Jul;
571(7765):349-354.
PMID: 31292549
Ascidian embryos highlight the importance of cell lineages in animal development. As simple proto-vertebrates, they also provide insights into the evolutionary origins of cell types such as cranial placodes and...
2.
Gibney P, Hickman M, Bradley P, Matese J, Botstein D
G3 (Bethesda)
. 2013 Jun;
3(8):1335-40.
PMID: 23749449
The genome of budding yeast (Saccharomyces cerevisiae) contains approximately 5800 protein-encoding genes, the majority of which are associated with some known biological function. Yet the extent of amino acid sequence...
3.
Swart E, Bracht J, Magrini V, Minx P, Chen X, Zhou Y, et al.
PLoS Biol
. 2013 Feb;
11(1):e1001473.
PMID: 23382650
The macronuclear genome of the ciliate Oxytricha trifallax displays an extreme and unique eukaryotic genome architecture with extensive genomic variation. During sexual genome development, the expressed, somatic macronuclear genome is...
4.
Brauer M, Huttenhower C, Airoldi E, Rosenstein R, Matese J, Gresham D, et al.
Mol Biol Cell
. 2007 Oct;
19(1):352-67.
PMID: 17959824
We studied the relationship between growth rate and genome-wide gene expression, cell cycle progression, and glucose metabolism in 36 steady-state continuous cultures limited by one of six different nutrients (glucose,...
5.
Demeter J, Beauheim C, Gollub J, Hernandez-Boussard T, Jin H, Maier D, et al.
Nucleic Acids Res
. 2006 Dec;
35(Database issue):D766-70.
PMID: 17182626
The Stanford Microarray Database (SMD; http://smd.stanford.edu/) is a research tool and archive that allows hundreds of researchers worldwide to store, annotate, analyze and share data generated by microarray technology. SMD...
6.
Shah P, MacFarlane R, Bhattacharya D, Matese J, Demeter J, Stroup S, et al.
Eukaryot Cell
. 2005 Mar;
4(3):504-15.
PMID: 15755913
Variable phenotypes have been identified for Entamoeba species. Entamoeba histolytica is invasive and causes colitis and liver abscesses but only in approximately 10% of infected individuals; 90% remain asymptomatically colonized....
7.
Ball C, Awad I, Demeter J, Gollub J, Hebert J, Hernandez-Boussard T, et al.
Nucleic Acids Res
. 2004 Dec;
33(Database issue):D580-2.
PMID: 15608265
The Stanford Microarray Database (SMD) (http://smd.stanford.edu) is a research tool for hundreds of Stanford researchers and their collaborators. In addition, SMD functions as a resource for the entire biological research...
8.
Rees C, Demeter J, Matese J, Botstein D, Sherlock G
BMC Bioinformatics
. 2004 Oct;
5:141.
PMID: 15458579
Background: When publishing large-scale microarray datasets, it is of great value to create supplemental websites where either the full data, or selected subsets corresponding to figures within the paper, can...
9.
Ball C, Brazma A, Causton H, Chervitz S, Edgar R, Hingamp P, et al.
Environ Health Perspect
. 2004 Sep;
112(12):A666-7.
PMID: 15345376
No abstract available.
10.
Ball C, Brazma A, Causton H, Chervitz S, Edgar R, Hingamp P, et al.
PLoS Biol
. 2004 Sep;
2(9):E317.
PMID: 15340489
No abstract available.