Jessica M J Swanson
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Explore the profile of Jessica M J Swanson including associated specialties, affiliations and a list of published articles.
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55
Citations
1054
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Recent Articles
1.
Nguyen J, da Hora G, Mifflin M, Roberts A, Swanson J
bioRxiv
. 2025 Feb;
PMID: 39896618
Significance: Lasso peptides are a unique class of ribosomally synthesized and post-translationally modified natural products with diverse biological activities and potential for therapeutic applications. Although direct synthesis would facilitate therapeutic...
2.
3.
Weckel-Dahman H, Carlsen R, Swanson J
J Chem Theory Comput
. 2024 Nov;
21(1):374-389.
PMID: 39536322
Attaining a complete thermodynamic and kinetic characterization for processes involving multiple interconnected rare-event transitions remains a central challenge in molecular biophysics. This challenge is amplified when the process must be...
4.
Carlsen R, Weckel-Dahman H, Swanson J
Biophys J
. 2024 Oct;
123(24):4304-4315.
PMID: 39478342
The dissipation of electrochemical gradients through ion channels plays a central role in biology. Herein we use voltage-responsive kinetic models of ion channels to explore how electrical and chemical potentials...
5.
Carlsen R, Weckel-Dahman H, Swanson J
bioRxiv
. 2024 Aug;
PMID: 39185213
The dissipation of electrochemical gradients through ion channels plays a central role in biology. Herein we use voltage responsive kinetic models of ion channels to explore how electrical and chemical...
6.
Weckel-Dahman H, Carlsen R, Swanson J
bioRxiv
. 2024 Aug;
PMID: 39131358
Attaining a complete thermodynamic and kinetic characterization for processes involving multiple interconnected rare-event transitions remains a central challenge in molecular biophysics. This challenge is amplified when the process must be...
7.
Kim S, Swanson J, Voth G
J Phys Chem B
. 2024 Apr;
128(16):4033.
PMID: 38626398
No abstract available.
8.
da Hora G, Oh M, Nguyen J, Swanson J
J Phys Chem B
. 2024 Apr;
128(17):4063-4075.
PMID: 38568862
Identifying optimal reaction coordinates for complex conformational changes and protein folding remains an outstanding challenge. This study combines collective variable (CV) discovery based on chemical intuition and machine learning with...
9.
da Hora G, Oh M, Mifflin M, Digal L, Roberts A, Swanson J
J Am Chem Soc
. 2024 Jan;
146(7):4444-4454.
PMID: 38166378
Lasso peptides make up a class of natural products characterized by a threaded structure. Given their small size and stability, chemical synthesis would offer tremendous potential for the development of...
10.
Oh M, da Hora G, Swanson J
J Chem Theory Comput
. 2023 Nov;
19(23):8886-8900.
PMID: 37943658
Molecular simulations are commonly used to understand the mechanism of membrane permeation of small molecules, particularly for biomedical and pharmaceutical applications. However, despite significant advances in computing power and algorithms,...