Jean-Francois Pombert
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Explore the profile of Jean-Francois Pombert including associated specialties, affiliations and a list of published articles.
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49
Citations
927
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Recent Articles
1.
Crepeault O, Otis C, Pombert J, Turmel M, Lemieux C
J Phycol
. 2024 Jul;
60(4):1021-1027.
PMID: 38989846
The marine prasinophyte green algae Pycnococcus provasolii and Pseudoscourfieldia marina represent the only extant genera and known species of the Pycnococcaceae. However, their taxonomic status needs to be reassessed, owing...
2.
Thomas Julian A, Pombert J
bioRxiv
. 2024 May;
PMID: 38798446
Investigating collinearity between chromosomes is often used in comparative genomics to help identify gene orthologs, pinpoint genes that might have been overlooked as part of annotation processes and/or perform various...
3.
Angst P, Pombert J, Ebert D, Fields P
G3 (Bethesda)
. 2023 Aug;
13(10).
PMID: 37565496
Microsporidia are intracellular parasitic fungi whose genomes rank among the smallest of all known eukaryotes. A number of outstanding questions remain concerning the evolution of their large-scale variation in genome...
4.
Dos Santos A, Thomas Julian A, Liang P, Juarez O, Pombert J
BMC Genomics
. 2023 May;
24(1):237.
PMID: 37142951
Background: Microsporidia are diverse spore forming, fungal-related obligate intracellular pathogens infecting a wide range of hosts. This diversity is reflected at the genome level with sizes varying by an order...
5.
Thomas Julian A, Dos Santos A, Pombert J
Bioinform Adv
. 2022 Jun;
1(1).
PMID: 35664289
Motivation: Inferring protein function is an integral part of genome annotation and analysis. This process is usually performed , and most inferences are based on sequence homology approaches, which can...
6.
Dos Santos A, Thomas Julian A, Pombert J
Genome Biol Evol
. 2022 Apr;
14(4).
PMID: 35439302
DNA repair is an important component of genome integrity and organisms with reduced repair capabilities tend to accumulate mutations at elevated rates. Microsporidia are intracellular parasites exhibiting high levels of...
7.
de Albuquerque N, Haag K, Fields P, Cabalzar A, Ben-Ami F, Pombert J, et al.
J Eukaryot Microbiol
. 2022 Mar;
69(3):e12902.
PMID: 35279911
Speciation is a complex and continuous process that makes the delineation of species boundaries a challenging task in particular in species with little morphological differentiation, such as parasites. In this...
8.
Haag K, Pombert J, Sun Y, de Albuquerque N, Batliner B, Fields P, et al.
Genome Biol Evol
. 2019 Dec;
12(1):3599-3614.
PMID: 31825473
Microsporidia have the leanest genomes among eukaryotes, and their physiological and genomic simplicity has been attributed to their intracellular, obligate parasitic life-style. However, not all microsporidia genomes are small or...
9.
Lemieux C, Turmel M, Otis C, Pombert J
Nat Commun
. 2019 Sep;
10(1):4061.
PMID: 31492891
Tiny marine green algae issued from two deep branches of the Chlorophyta, the Mamiellophyceae and Chloropicophyceae, dominate different regions of the oceans and play key roles in planktonic communities. Considering...
10.
Hingston P, Truelstrup Hansen L, Pombert J, Wang S
Int J Food Microbiol
. 2019 Jul;
306:108262.
PMID: 31362162
In this study, we show that growth and prolonged storage of Listeria monocytogenes at 4 °C can promote the selection of variants with enhanced cold and heat tolerance. Enhanced cold-tolerance...