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Jared T Simpson

Explore the profile of Jared T Simpson including associated specialties, affiliations and a list of published articles. Areas
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Articles 58
Citations 9978
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Recent Articles
1.
Nasir J, Maguire F, Smith K, Panousis E, Baker S, Aftanas P, et al.
NAR Genom Bioinform . 2024 Dec; 6(4):lqae176. PMID: 39703420
The incorporation of sequencing technologies in frontline and public health healthcare settings was vital in developing virus surveillance programs during the Coronavirus Disease 2019 (COVID-19) pandemic caused by transmission of...
2.
Sokolowski D, Miclaus M, Nater A, Faykoo-Martinez M, Hoekzema K, Zuzarte P, et al.
bioRxiv . 2024 Dec; PMID: 39651266
The naked mole-rat (NMR; ) is a eusocial subterranean rodent with a highly unusual set of physiological traits that has attracted great interest amongst the scientific community. However, the genetic...
3.
Feng S, Marhon S, Sokolowski D, DCosta A, Soares F, Mehdipour P, et al.
Nat Commun . 2024 Oct; 15(1):9321. PMID: 39472584
Inactivating mutations in SMARCB1 confer an oncogenic dependency on EZH2 in atypical teratoid rhabdoid tumors (ATRTs), but the underlying mechanism has not been fully elucidated. We found that the sensitivity...
4.
Gill E, Jia B, Murall C, Poujol R, Anwar M, John N, et al.
Microb Genom . 2024 Oct; 10(10). PMID: 39401061
The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform the public health response. Millions of SARS-CoV-2 genome...
5.
Gill E, Jia B, Murall C, Poujol R, Anwar M, John N, et al.
ArXiv . 2024 May; PMID: 38764594
The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform public health response. Millions of SARS-CoV-2 genome sequences...
6.
Simpson J
bioRxiv . 2024 Mar; PMID: 38464143
DNA sequencing of tumours to identify somatic mutations has become a critical tool to guide the type of treatment given to cancer patients. The gold standard for mutation calling is...
7.
Sjaarda C, Lau L, Simpson J, Fattouh R, Biondi M, Maguire F, et al.
JAMA Netw Open . 2023 Jul; 6(7):e2324963. PMID: 37477915
Importance: Nirmatrelvir-ritonavir is an oral antiviral medication that improves outcomes in SARS-CoV-2 infections. However, there is concern that antiviral resistance will develop and that these viruses could be selected for...
8.
Kain D, Isabel S, Abdulnoor M, Boissinot K, De Borja R, Filkin A, et al.
Infect Control Hosp Epidemiol . 2023 Mar; 44(11):1829-1833. PMID: 36912329
Objective: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) hospital outbreaks have been common and devastating during the coronavirus disease 2019 (COVID-19) pandemic. Understanding SARS-CoV-2 transmission in these environments is critical...
9.
Mimosa M, Al-Ameri W, Simpson J, Nakhla M, Boissinot K, Munoz D, et al.
J Mol Diagn . 2022 Dec; 25(3):133-142. PMID: 36565986
The use of standard next-generation sequencing technologies to detect key mutations in IDH genes for glioma diagnosis imposes several challenges, including high capital cost and turnaround delays associated with the...
10.
Isabel S, Abdulnoor M, Boissinot K, Isabel M, De Borja R, Zuzarte P, et al.
Sci Rep . 2022 Aug; 12(1):14159. PMID: 35986021
No abstract available.